RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PHACTR4Q8IZ21 702 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 PANK1Q8TE04 598 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 KCNC2Q96PR1 638 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 TRAIPQ9BWF2 469 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 HDAC8Q9BY41 377 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 TIMELESSQ9UNS1 1208 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 KCTD3Q9Y597 815 aa4.94□□□□□ -1.62
CCNT1-203ENST00000550457 TMEM82A0PJX8 343 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 TRIM13O60858 407 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 UBOX5O94941 541 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 RPL10P27635 214 aaKnown RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 GBP2P32456 591 aaPredicted RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 DNAJC14Q6Y2X3 702 aaPredicted RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 RNF111Q6ZNA4 994 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 REC114Q7Z4M0 266 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 TMC3Q7Z5M5 1100 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 SYTL5Q8TDW5 730 aaPredicted RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 RELTQ969Z4 430 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 SYTL4Q96C24 671 aaPredicted RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 CRELD1Q96HD1 420 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 FOXP3Q9BZS1 431 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 ZCCHC4Q9H5U6 513 aa4.93□□□□□ -1.62
CCNT1-203ENST00000550457 MBD1Q9UIS9 605 aaPredicted RBP4.93□□□□□ -1.62
CCNT1-203ENST00000550457 OR14I1A6ND48 311 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 RGS13O14921 159 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 PI3P19957 117 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 SDHBP21912 280 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 EPHB3P54753 998 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 TAGLNQ01995 201 aaKnown RBP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 SNW1Q13573 536 aaKnown RBP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 ADGRF1Q5T601 910 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 DIEXFQ68CQ4 756 aaKnown RBP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 ZPBP2Q6X784 338 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 SND1Q7KZF4 910 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 WAPLQ7Z5K2 1190 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 FBXO33Q7Z6M2 555 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 MARCH10Q8NA82 808 aaPredicted RBP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 ENOX1Q8TC92 643 aaKnown RBP4.92□□□□□ -1.62
CCNT1-203ENST00000550457 MAP6Q96JE9 813 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 HHIPL1Q96JK4 782 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 RSRP1Q9BUV0 290 aa4.92□□□□□ -1.62
CCNT1-203ENST00000550457 SLC22A31A6NKX4 558 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 MINDY4BA8MYZ0 360 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 TLR3O15455 904 aaKnown RBP4.91□□□□□ -1.62
CCNT1-203ENST00000550457 NRDCO43847 1150 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 GBP1P32455 592 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 SRSF3P84103 164 aaKnown RBP4.91□□□□□ -1.62
CCNT1-203ENST00000550457 XPCQ01831 940 aaPredicted RBP4.91□□□□□ -1.62
CCNT1-203ENST00000550457 MPP2Q14168 576 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 BBS9Q3SYG4 887 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 ZNF385BQ569K4 471 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 ARSHQ5FYA8 562 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 SNAP47Q5SQN1 464 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 TCERG1LQ5VWI1 586 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 FAM196AQ6ZSG2 479 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 RELL1Q8IUW5 271 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 DAGLBQ8NCG7 672 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 TCTN2Q96GX1 697 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 PLCD4Q9BRC7 762 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 EPB41L4AQ9HCS5 686 aaPredicted RBP4.91□□□□□ -1.62
CCNT1-203ENST00000550457 ZMYM5Q9UJ78 669 aa4.91□□□□□ -1.62
CCNT1-203ENST00000550457 FOXD2O60548 495 aaPredicted RBP4.9□□□□□ -1.63
CCNT1-203ENST00000550457 FKTNO75072 461 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 POLR2BP30876 1174 aaKnown RBP4.9□□□□□ -1.63
CCNT1-203ENST00000550457 VIPR1P32241 457 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 KIR3DS1Q14943 382 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 NBPF9Q3BBW0 867 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 NBPF12Q5TAG4 269 aaPredicted RBP4.9□□□□□ -1.63
CCNT1-203ENST00000550457 CEP128Q6ZU80 1094 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 DACT3Q96B18 629 aaPredicted RBP4.9□□□□□ -1.63
CCNT1-203ENST00000550457 CNTD2Q9H8S5 307 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 CRTAC1Q9NQ79 661 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 COPRSQ9NQ92 184 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 TCFL5Q9UL49 500 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 MINPP1Q9UNW1 487 aa4.9□□□□□ -1.63
CCNT1-203ENST00000550457 HRKO00198 91 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 RFXAPO00287 272 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 KIR2DL1P43626 348 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-203ENST00000550457 KIR2DL2P43627 348 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-203ENST00000550457 YBX1P67809 324 aaKnown RBP4.89□□□□□ -1.63
CCNT1-203ENST00000550457 RNF4P78317 190 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 SLC14A2Q15849 920 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 ZNF655Q8N720 491 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-203ENST00000550457 LINC00116Q8NCU8 138 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 SIGLEC10Q96LC7 697 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 XYLT2Q9H1B5 865 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 ASCC2Q9H1I8 757 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-203ENST00000550457 KBTBD4Q9NVX7 518 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 PCDHB14Q9Y5E9 798 aa4.89□□□□□ -1.63
CCNT1-203ENST00000550457 PATL2C9JE40 543 aaKnown RBP4.88□□□□□ -1.63
CCNT1-203ENST00000550457 SORBS3O60504 671 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 PRAMEF1O95521 474 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 SYPP08247 313 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 RAG1P15918 1043 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 CEBPAP49715 358 aaPredicted RBP4.88□□□□□ -1.63
CCNT1-203ENST00000550457 PCBP3P57721 371 aaKnown RBP4.88□□□□□ -1.63
CCNT1-203ENST00000550457 OVOS1Q6IE37 1185 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 FBXL19Q6PCT2 694 aa4.88□□□□□ -1.63
CCNT1-203ENST00000550457 ERMP1Q7Z2K6 904 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms