RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 MYO6Q9UM54 1294 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 KCNJ18B7U540 433 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 PLEKHA8P1O95397 391 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 KRT9P35527 623 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 LMAN1P49257 510 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 GYS2P54840 703 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 VSNL1P62760 191 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 KCNJ12Q14500 433 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 CASP8Q14790 479 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 TMTC3Q6ZXV5 915 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 VPS16Q9H269 839 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 ACBD3Q9H3P7 528 aa11.15□□□□□ -0.63
SMARCD1-205ENST00000548573 H7C1D1 291 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 RPS6KA5O75582 802 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 ABL1P00519 1130 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 IGHMBP2P38935 993 aaKnown RBP11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 ADGRA1Q86SQ6 560 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 FAM71BQ8TC56 605 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 MTRQ99707 1265 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 BLZF1Q9H2G9 400 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 VPS18Q9P253 973 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 EPN1Q9Y6I3 576 aaPredicted RBP11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 CNTNAP5Q8WYK1 1306 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 MYH8P13535 1937 aa11.14□□□□□ -0.63
SMARCD1-205ENST00000548573 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 PSMD14O00487 310 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 NDUFA10O95299 355 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 RHOXF2BP0C7M4 288 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 SEMA3FQ13275 785 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 ARL6IP4Q66PJ3 421 aaKnown RBP11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 LEKR1Q6ZMV7 388 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 ZNF662Q6ZS27 426 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 STAMQ92783 540 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 RHOXF2Q9BQY4 288 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 HAUS4Q9H6D7 363 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 MED4Q9NPJ6 270 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 FEZ2Q9UHY8 353 aaPredicted RBP11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 A0A1W2PQC6 194 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 hCG_1642624A0A1W2PR95 340 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 RPN1P04843 607 aaKnown RBP11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 IVLP07476 585 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 MCM3P25205 808 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 CDC25AP30304 524 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 LONP1P36776 959 aaKnown RBP11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 UBXN1Q04323 297 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 HSP90B2PQ58FF3 399 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 OR8K1Q8NGG5 319 aa11.13□□□□□ -0.63
SMARCD1-205ENST00000548573 A0A0U1RQG5 324 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CHRNDQ07001 517 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 IL17AQ16552 155 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 NOA1Q8NC60 698 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 RPGRIP1Q96KN7 1286 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 DNAJC7Q99615 494 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 SUGCTQ9HAC7 445 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 REXO2Q9Y3B8 237 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 RREB1Q92766 1687 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CICQ96RK0 1608 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 PARP1P09874 1014 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 SCG2P13521 617 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 EEF1GP26641 437 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 PRCPP42785 496 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 NLRP5P59047 1200 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 MB21D1Q8N884 522 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CHP1Q99653 195 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 GNL3LQ9NVN8 582 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CAPN11Q9UMQ6 739 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 FAN1Q9Y2M0 1017 aa11.12□□□□□ -0.63
SMARCD1-205ENST00000548573 CACNA1SQ13698 1873 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 XIRP1Q702N8 1843 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 LAMB2P55268 1798 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 LGALS16A8MUM7 142 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 SMIM22K7EJ46 135 aa11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-205ENST00000548573 COBLO75128 1261 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms