RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 RANBP6O60518 1105 aaKnown RBP27.53■■■□□ 2
CTDSP2-203ENST00000547701 PLA2G6O60733 806 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 CAPN2P17655 700 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 MORN1Q5T089 497 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 GMCL1Q96IK5 515 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 CCDC136Q96JN2 1154 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 PAGR1Q9BTK6 254 aa27.53■■■□□ 2
CTDSP2-203ENST00000547701 ADCY3O60266 1144 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 NEFLP07196 543 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 IMMTQ16891 758 aaKnown RBP27.52■■■□□ 2
CTDSP2-203ENST00000547701 GPR142Q7Z601 462 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 PLEKHH3Q7Z736 793 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 TBC1D10CQ8IV04 446 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 NUDT12Q9BQG2 462 aa27.52■■■□□ 2
CTDSP2-203ENST00000547701 COL11A1P12107 1806 aaPredicted RBP27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 STRNO43815 780 aa27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 PEX10O60683 326 aa27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 FAM83BQ5T0W9 1011 aa27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 PRPF38AQ8NAV1 312 aaKnown RBP27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 SPATC1LQ9H0A9 340 aa27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 ZNF236Q9UL36 1845 aa27.51■■□□□ 1.99
CTDSP2-203ENST00000547701 VWA5AO00534 786 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 ATP2A1O14983 1001 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 FDX1P10109 184 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 HAND2P61296 217 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 TRMT44Q8IYL2 757 aaKnown RBP27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 REPS2Q8NFH8 660 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 ATG4CQ96DT6 458 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 FEM1BQ9UK73 627 aa27.5■■□□□ 1.99
CTDSP2-203ENST00000547701 SLC15A5A6NIM6 579 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 HOXC6P09630 235 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 CCDC178Q5BJE1 867 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 SH3TC2Q8TF17 1288 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 ESR2Q92731 530 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 SLF1Q9BQI6 1058 aa27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 MOV10L1Q9BXT6 1211 aaKnown RBP27.49■■□□□ 1.99
CTDSP2-203ENST00000547701 SLC25A27O95847 323 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 PTPREP23469 700 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 UBXN2AP68543 259 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 SLFN13Q68D06 897 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 CCAR1Q8IX12 1150 aaKnown RBP27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 ABRAQ8N0Z2 381 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 ANKS1AQ92625 1134 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 MROH8Q9H579 483 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 FBXO28Q9NVF7 368 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 STX8Q9UNK0 236 aa27.48■■□□□ 1.99
CTDSP2-203ENST00000547701 COPB2P35606 906 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 GRB14Q14449 540 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 TMEM132BQ14DG7 1078 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 RCSD1Q6JBY9 416 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 DGKHQ86XP1 1220 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 RIOX2Q8IUF8 465 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 MAP4K1Q92918 833 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 TMEM106CQ9BVX2 250 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 CNNM2Q9H8M5 875 aa27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 ZNF214Q9UL59 606 aaPredicted RBP27.47■■□□□ 1.99
CTDSP2-203ENST00000547701 ZNFX1Q9P2E3 1918 aaKnown RBP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 NMT2O60551 498 aa27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 ECM2O94769 699 aaPredicted RBP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 TOP1P11387 765 aaKnown RBP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 BMP3P12645 472 aa27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 LRRC47Q8N1G4 583 aaKnown RBP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 U3KPZ7 1027 aaPredicted RBP27.46■■□□□ 1.99
CTDSP2-203ENST00000547701 NEDD4P46934 1319 aa27.45■■□□□ 1.99
CTDSP2-203ENST00000547701 IGHA2P01877 340 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 HMGCRP04035 888 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 RGS2P41220 211 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 OAZ1P54368 228 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 SOX10P56693 466 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 MAP2K5Q13163 448 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 FAM160B2Q86V87 743 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 KRT23Q9C075 422 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 TOMM22Q9NS69 142 aa27.45■■□□□ 1.98
CTDSP2-203ENST00000547701 PTH1RQ03431 593 aa27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 RRP12Q5JTH9 1297 aaKnown RBP27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 CHURC1Q8WUH1 139 aa27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 NUP88Q99567 741 aaPredicted RBP27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 TMEM47Q9BQJ4 181 aa27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 SLC38A10Q9HBR0 1119 aa27.44■■□□□ 1.98
CTDSP2-203ENST00000547701 GJB1P08034 283 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 ERCC3P19447 782 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 STAT3P40763 770 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 SLC1A4P43007 532 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 MAP3K21Q5TCX8 1036 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 IQCA1Q86XH1 822 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 DCAF4Q8WV16 495 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 APBA2Q99767 749 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 IVNS1ABPQ9Y6Y0 642 aa27.43■■□□□ 1.98
CTDSP2-203ENST00000547701 POTEFA5A3E0 1075 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 SNHG28P0DPA3 235 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 ELNP15502 786 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 STAT2P52630 851 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 MTFR1Q15390 333 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 BTNL9Q6UXG8 535 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 NKX2-3Q8TAU0 364 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 ESYT1Q9BSJ8 1104 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 ZSWIM5Q9P217 1185 aa27.42■■□□□ 1.98
CTDSP2-203ENST00000547701 RAD21O60216 631 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms