RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 KIF22Q14807 665 aa20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 FAM110CQ1W6H9 321 aa20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 LLPHQ9BRT6 129 aaKnown RBP20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 TXNRD2Q9NNW7 524 aa20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 SRRDQ9UH36 339 aa20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 GNRH1P01148 92 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 CYP21A2P08686 494 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 VCAM1P19320 739 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 RASA1P20936 1047 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 PABPC4Q13310 644 aaKnown RBP eCLIP20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 DHX32Q7L7V1 743 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 ANP32BQ92688 251 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 RLFQ13129 1914 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 CPA1P15085 419 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 GCLCP48506 637 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 HERVK_113P62684 666 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 TOB2Q14106 344 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 GPT2Q8TD30 523 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 CCDC17Q96LX7 622 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 FEZ1Q99689 392 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 MORF4L1Q9UBU8 362 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 GABRQQ9UN88 632 aa20.12■□□□□ 0.81
RBFOX1-207ENST00000547338 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 FMNL1O95466 1100 aaPredicted RBP20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 HSPD1P10809 573 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 TDO2P48775 406 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 IRX3P78415 501 aaPredicted RBP20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 ARHGEF6Q15052 776 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 STK11IPQ8N1F8 1099 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 AGXT2Q9BYV1 514 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 RBPJLQ9UBG7 517 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 TACC3Q9Y6A5 838 aa20.11■□□□□ 0.81
RBFOX1-207ENST00000547338 RBBP6Q7Z6E9 1792 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 APPP05067 770 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 USP14P54578 494 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 FCGRTP55899 365 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 PRKCZQ05513 592 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 ZNF333Q96JL9 665 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 MTMR6Q9Y217 621 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 PLXNB2O15031 1838 aa20.1■□□□□ 0.81
RBFOX1-207ENST00000547338 CNMDO75829 334 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 LARGE1O95461 756 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 ICA1Q05084 483 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 CATSPERGQ6ZRH7 1159 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 SH3TC2Q8TF17 1288 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 MYPNQ86TC9 1320 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 PRDM1O75626 825 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 PRMT2P55345 433 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 UBE2HP62256 183 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 EXOSC10Q01780 885 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 LRSAM1Q6UWE0 723 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 RGS22Q8NE09 1264 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 RPAP3Q9H6T3 665 aaPredicted RBP20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
RBFOX1-207ENST00000547338 A0A0G2JMZ2 1700 aa20.08■□□□□ 0.8
RBFOX1-207ENST00000547338 IGKV6D-41A0A0C4DH26 115 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 IMMTQ16891 758 aaKnown RBP20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 Q3C1V9 767 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 GTF3C6Q969F1 213 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 WDR19Q8NEZ3 1342 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 POTEFA5A3E0 1075 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 PFKFB2O60825 505 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 HMGN5P82970 282 aaKnown RBP20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 PPARAQ07869 468 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 Q6ZUG5 572 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 NAPBQ9H115 298 aa20.07■□□□□ 0.8
RBFOX1-207ENST00000547338 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 TNPO2O14787 897 aaKnown RBP20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 FLT3LGP49771 235 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 ST3GAL1Q11201 340 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 FOXD4L5Q5VV16 416 aaPredicted RBP20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 LBX2Q6XYB7 198 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 FOXD4L4Q8WXT5 416 aaPredicted RBP20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 VCPKMTQ9H867 229 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 KANSL2Q9H9L4 492 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 INCENPQ9NQS7 918 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 GJD2Q9UKL4 321 aa20.06■□□□□ 0.8
RBFOX1-207ENST00000547338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms