RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MYO1CO00159 1063 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 PDE8AO60658 829 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 EVX2Q03828 476 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 HNRNPLLQ8WVV9 542 aaKnown RBP22.93■■□□□ 1.26
TMEM260-203ENST00000539559 SRGAP2O75044 1071 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 SLC5A1P13866 664 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 KRT9P35527 623 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 USP5P45974 858 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 CRKLP46109 303 aaKnown RBP22.93■■□□□ 1.26
TMEM260-203ENST00000539559 GOLGA5Q8TBA6 731 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
TMEM260-203ENST00000539559 GSDMAQ96QA5 445 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 CTAGE1Q96RT6 745 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 PHF20Q9BVI0 1012 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 ABCF2Q9UG63 623 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 GDAQ9Y2T3 454 aa22.93■■□□□ 1.26
TMEM260-203ENST00000539559 WTIPA6NIX2 430 aaPredicted RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 PES1O00541 588 aaKnown RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 ACTN2P35609 894 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 EEF2KMTQ96G04 330 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 BCL9LQ86UU0 1499 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 MYH6P13533 1939 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 ANKRD65E5RJM6 399 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 COPB1P53618 953 aaKnown RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 SEC23AQ15436 765 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 ENAHQ8N8S7 591 aaPredicted RBP22.92■■□□□ 1.26
TMEM260-203ENST00000539559 HINFPQ9BQA5 517 aa22.92■■□□□ 1.26
TMEM260-203ENST00000539559 TRIM49BA6NDI0 452 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 ERLIN1O75477 346 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 REXO2Q9Y3B8 237 aaKnown RBP22.91■■□□□ 1.26
TMEM260-203ENST00000539559 NID2Q14112 1375 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 ZMYND10O75800 440 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 SKIDA1Q1XH10 827 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 TTC38Q5R3I4 469 aa22.91■■□□□ 1.26
TMEM260-203ENST00000539559 RNF26Q9BY78 433 aaPredicted RBP22.91■■□□□ 1.26
TMEM260-203ENST00000539559 CYP7A1P22680 504 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 MCM7P33993 719 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 TMTC1Q8IUR5 882 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 NELFBQ8WX92 580 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 MYO6Q9UM54 1294 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 KCNJ18B7U540 433 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 KCNQ2O43526 872 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 ITPK1Q13572 414 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 KCNJ12Q14500 433 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 IL17AQ16552 155 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 ZNF34Q8IZ26 560 aa22.9■■□□□ 1.26
TMEM260-203ENST00000539559 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
TMEM260-203ENST00000539559 UBXN1Q04323 297 aa22.89■■□□□ 1.26
TMEM260-203ENST00000539559 FUT2Q10981 343 aa22.89■■□□□ 1.26
TMEM260-203ENST00000539559 PIK3AP1Q6ZUJ8 805 aa22.89■■□□□ 1.26
TMEM260-203ENST00000539559 CAPZA3Q96KX2 299 aa22.89■■□□□ 1.26
TMEM260-203ENST00000539559 NPY5RQ15761 445 aa22.89■■□□□ 1.25
TMEM260-203ENST00000539559 CYP26C1Q6V0L0 522 aa22.89■■□□□ 1.25
TMEM260-203ENST00000539559 LEKR1Q6ZMV7 388 aa22.89■■□□□ 1.25
TMEM260-203ENST00000539559 PSD3Q9NYI0 1048 aa22.89■■□□□ 1.25
TMEM260-203ENST00000539559 RRP15Q9Y3B9 282 aaKnown RBP22.89■■□□□ 1.25
TMEM260-203ENST00000539559 ANKRD36CQ5JPF3 1778 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 NMT2O60551 498 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 AMPD2Q01433 879 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 TMTC2Q8N394 836 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 POTEB2H3BUK9 544 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 EIF3JO75822 258 aaKnown RBP22.88■■□□□ 1.25
TMEM260-203ENST00000539559 XBP1P17861 261 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 TCP11X2Q5H9J9 407 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 SRLQ86TD4 932 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 GSPT2Q8IYD1 628 aaKnown RBP22.88■■□□□ 1.25
TMEM260-203ENST00000539559 MROH5Q6ZUA9 1318 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 MYH2Q9UKX2 1941 aa22.88■■□□□ 1.25
TMEM260-203ENST00000539559 DYNLL1P63167 89 aaKnown RBP22.87■■□□□ 1.25
TMEM260-203ENST00000539559 PAK1Q13153 545 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 E2F4Q16254 413 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 IFIT1BQ5T764 474 aaKnown RBP22.87■■□□□ 1.25
TMEM260-203ENST00000539559 RIN2Q8WYP3 895 aaPredicted RBP22.87■■□□□ 1.25
TMEM260-203ENST00000539559 LIMA1Q9UHB6 759 aaKnown RBP22.87■■□□□ 1.25
TMEM260-203ENST00000539559 NUP98P52948 1817 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 WHAMMP3Q1A5X7 153 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 ESR2Q92731 530 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 FERMT2Q96AC1 680 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 PLIN2Q99541 437 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 CWC15Q9P013 229 aaKnown RBP22.87■■□□□ 1.25
TMEM260-203ENST00000539559 RSPH14Q9UHP6 348 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 SPATA31A6Q5VVP1 1343 aa22.87■■□□□ 1.25
TMEM260-203ENST00000539559 TTC26A0AVF1 554 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 ATP1A1P05023 1023 aaKnown RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 PRCPP42785 496 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 TNNT3P45378 269 aaPredicted RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 ZSCAN10Q96SZ4 725 aaPredicted RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 RASSF4Q9H2L5 321 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 RNF41Q9H4P4 317 aaPredicted RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 ITIH6Q6UXX5 1313 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 FECHP22830 423 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 PMS1P54277 932 aaKnown RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 PDXDC2PQ6P474 469 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 CCDC51Q96ER9 411 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 MMS19Q96T76 1030 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 EPN1Q9Y6I3 576 aaPredicted RBP22.86■■□□□ 1.25
TMEM260-203ENST00000539559 MYH3P11055 1940 aa22.86■■□□□ 1.25
TMEM260-203ENST00000539559 PNPLA7Q6ZV29 1317 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms