RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MLKLQ8NB16 471 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 LMNAP02545 664 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 EHHADHQ08426 723 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF449Q6P9G9 518 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 KIFC2Q96AC6 838 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ECT2Q9H8V3 914 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ZBTB40Q9NUA8 1239 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 PARP2Q9UGN5 583 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 JAK2O60674 1132 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF444Q8N0Y2 327 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 SMYD3Q9H7B4 428 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 DAAM1Q9Y4D1 1078 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 C2orf54Q08AI8 447 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 MAML1Q92585 1016 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 AMFRQ9UKV5 643 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ORC6Q9Y5N6 252 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 DOCK7Q96N67 2140 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC169A6NNP5 214 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 PLCD1P51178 756 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 RASA3Q14644 834 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 USHBP1Q8N6Y0 703 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 TDRD7Q8NHU6 1098 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 RIC8AQ9NPQ8 531 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 GCFC2P16383 781 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 FCHSD1Q86WN1 690 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 FAM207AQ9NSI2 230 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 A0A087WWV3 80 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 UBE3BQ7Z3V4 1068 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF280CQ8ND82 737 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 PPWD1Q96BP3 646 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 EPS15L1Q9UBC2 864 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 GCC2Q8IWJ2 1684 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 AHCTF1Q8WYP5 2266 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 RWDD2BP57060 319 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 MIS12Q9H081 205 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 IBTKQ9P2D0 1353 aaPredicted RBP6.21□□□□□ -1.41
CSMD1-215ENST00000537824 DOCK11Q5JSL3 2073 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 STXBP3O00186 592 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 SCP2P22307 547 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF20Q3BBV1 942 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 SCYL1Q96KG9 808 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC138Q96M89 665 aa6.21□□□□□ -1.41
CSMD1-215ENST00000537824 IFIT1BQ5T764 474 aaKnown RBP6.21□□□□□ -1.41
CSMD1-215ENST00000537824 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 BICDL1Q6ZP65 573 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 TTLL11Q8NHH1 800 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 U2AF1L4Q8WU68 220 aaKnown RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 HAUS2Q9NVX0 235 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 KIAA1468Q9P260 1216 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 SPAG7O75391 227 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 TNNI2P48788 182 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 RAD23BP54727 409 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ST5P78524 1137 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 AKNAD1Q5T1N1 836 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 CEP85Q6P2H3 762 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 HAUS8Q9BT25 410 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 POLKQ9UBT6 870 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 USTQ9Y2C2 406 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 SPTA1P02549 2419 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 DKC1O60832 514 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■■■ 36
CSMD1-215ENST00000537824 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 CRACR2BQ8N4Y2 399 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ARHGAP45Q92619 1136 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 GIMAP4Q9NUV9 329 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ARHGAP4P98171 946 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 THOC1Q96FV9 657 aaKnown RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ZNF229Q9UJW7 825 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 IFNB1P01574 187 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 KCNA4P22459 653 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ACBD5Q5T8D3 534 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 BSPRYQ5W0U4 402 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 CC2D1AQ6P1N0 951 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ATP8A1Q9Y2Q0 1164 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 MSH6P52701 1360 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 TOM1L2Q6ZVM7 507 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ZNF354CQ86Y25 554 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 WDR75Q8IWA0 830 aaKnown RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ESR2Q92731 530 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 COQ7Q99807 217 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 LZTS1Q9Y250 596 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 ZNF407Q9C0G0 2248 aa6.21□□□□□ -1.42
CSMD1-215ENST00000537824 RRP36Q96EU6 259 aaKnown RBP6.21□□□□□ -1.42
CSMD1-215ENST00000537824 CXCR5P32302 372 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 EPHB4P54760 987 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 MRPS25P82663 173 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 LGSNQ5TDP6 509 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 KRT80Q6KB66 452 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CAPN12Q6ZSI9 719 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 OLFM3Q96PB7 478 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 DDX28Q9NUL7 540 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SLC27A2O14975 620 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms