RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 KIAA0754O94854 1291 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 IL2RBP14784 551 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 GYG1P46976 350 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.459e-7■■■■■ 32.4
MCF2L-232ENST00000535094 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 PP2D1A8MPX8 630 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 NMT2O60551 498 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
MCF2L-232ENST00000535094 DYNLL1P63167 89 aaKnown RBP17.84■□□□□ 0.45
MCF2L-232ENST00000535094 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 CACNA2D4Q7Z3S7 1137 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 L1RE1Q9UN81 338 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 RIPOR2Q9Y4F9 1068 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 KRT83P78385 493 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 MED15Q96RN5 788 aa17.84■□□□□ 0.45
MCF2L-232ENST00000535094 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 RPN1P04843 607 aaKnown RBP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 CKAP4Q07065 602 aaKnown RBP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 SGMS1Q86VZ5 419 aa17.83■□□□□ 0.45
MCF2L-232ENST00000535094 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 RMND1Q9NWS8 449 aa17.83■□□□□ 0.45
MCF2L-232ENST00000535094 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.45
MCF2L-232ENST00000535094 USP17L12C9JPN9 530 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 USP17L21D6R901 530 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 ATP2C2O75185 946 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 PAFAH1B1P43034 410 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-232ENST00000535094 NLRP10Q86W26 655 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 FERMT2Q96AC1 680 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.448e-8■□□□□ 11.2
MCF2L-232ENST00000535094 SLIT1O75093 1534 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 RNF225M0QZC1 329 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-232ENST00000535094 MCM3P25205 808 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 GGCXP38435 758 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 ATP2B2Q01814 1243 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 BCAS4Q8TDM0 211 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 CDK5RAP3Q96JB5 506 aa17.83■□□□□ 0.44
MCF2L-232ENST00000535094 IQCEQ6IPM2 695 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 DTHD1Q6ZMT9 781 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 NOC4LQ9BVI4 516 aaKnown RBP17.82■□□□□ 0.44
MCF2L-232ENST00000535094 PRCPP42785 496 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 SETQ01105 290 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-232ENST00000535094 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
MCF2L-232ENST00000535094 TCP11X2Q5H9J9 407 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
MCF2L-232ENST00000535094 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 PDE8AO60658 829 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-232ENST00000535094 KRT26Q7Z3Y9 468 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 DUSP10Q9Y6W6 482 aa17.82■□□□□ 0.44
MCF2L-232ENST00000535094 DPYDQ12882 1025 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 ISCA1Q9BUE6 129 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 EXOC1Q9NV70 894 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 BMP15O95972 392 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 PDE4DQ08499 809 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 MUM1L1Q5H9M0 696 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 ZSCAN10Q96SZ4 725 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-232ENST00000535094 AATFQ9NY61 560 aaKnown RBP eCLIP17.81■□□□□ 0.44
MCF2L-232ENST00000535094 WNT7AO00755 349 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 GNGT1P63211 74 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
MCF2L-232ENST00000535094 MKNK2Q9HBH9 465 aa17.81■□□□□ 0.44
MCF2L-232ENST00000535094 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 MAATS1Q7Z4T9 603 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 HAUS4Q9H6D7 363 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
MCF2L-232ENST00000535094 TACC1O75410 805 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 GNAT2P19087 354 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 MED4Q9NPJ6 270 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 PPP1R3GB7ZBB8 358 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 BUB1O43683 1085 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 LETM2Q2VYF4 491 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 ANKRD18AQ8IVF6 992 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 SECISBP2LQ93073 1101 aaKnown RBP17.8■□□□□ 0.44
MCF2L-232ENST00000535094 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 TCP11L1Q9NUJ3 509 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
MCF2L-232ENST00000535094 RTL9Q8NET4 1388 aa17.8■□□□□ 0.44
MCF2L-232ENST00000535094 MEGF6O75095 1541 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 USP5P45974 858 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 KLK7P49862 253 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 TUBB2AQ13885 445 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 INF2Q27J81 1249 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 PPM1EQ8WY54 764 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 TUBB2BQ9BVA1 445 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 AGPAT5Q9NUQ2 364 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 GUCY2FP51841 1108 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 EHBP1Q8NDI1 1231 aa17.79■□□□□ 0.44
MCF2L-232ENST00000535094 JRKLQ9Y4A0 524 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms