RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 USP6NLQ92738 828 aa18.3■□□□□ 0.52
UBXN1-217ENST00000534176 HMX1Q9NP08 348 aaPredicted RBP18.3■□□□□ 0.52
UBXN1-217ENST00000534176 BTBD7Q9P203 1132 aa18.3■□□□□ 0.52
UBXN1-217ENST00000534176 CENPFP49454 3210 aa18.3■□□□□ 0.52
UBXN1-217ENST00000534176 FOXP2O15409 715 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 RAD21O60216 631 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 ELNP15502 786 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 GRB14Q14449 540 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 MTFR1Q15390 333 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 CCDC178Q5BJE1 867 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 TTC22Q5TAA0 569 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 WDR78Q5VTH9 848 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 SLF1Q9BQI6 1058 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
UBXN1-217ENST00000534176 FEM1BQ9UK73 627 aa18.29■□□□□ 0.52
UBXN1-217ENST00000534176 ZNF213O14771 459 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 SGPL1O95470 568 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 NDUFB10O96000 172 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 EN2P19622 333 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-217ENST00000534176 CYP2B6P20813 491 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
UBXN1-217ENST00000534176 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
UBXN1-217ENST00000534176 GMCL1Q96IK5 515 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
UBXN1-217ENST00000534176 TCP11L1Q9NUJ3 509 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-217ENST00000534176 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
UBXN1-217ENST00000534176 VWA5AO00534 786 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 ATP2A1O14983 1001 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
UBXN1-217ENST00000534176 PLA2G6O60733 806 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 OAZ1P54368 228 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
UBXN1-217ENST00000534176 PLS1Q14651 629 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 AKNAD1Q5T1N1 836 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 MFSD14CQ5VZR4 134 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 POTEEQ6S8J3 1075 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
UBXN1-217ENST00000534176 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 RIOX2Q8IUF8 465 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 ANKLE1Q8NAG6 615 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 ATG4CQ96DT6 458 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 TTC14Q96N46 770 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
UBXN1-217ENST00000534176 RLFQ13129 1914 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 MYH4Q9Y623 1939 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 ZBED4O75132 1171 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 FCER1AP12319 257 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 BMP3P12645 472 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 ERCC3P19447 782 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 STAT3P40763 770 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 CTDSPL2Q05D32 466 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
UBXN1-217ENST00000534176 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 DPP9Q86TI2 863 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 ESR2Q92731 530 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 TEX13BQ9BXU2 312 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBXN1-217ENST00000534176 UNC93B1Q9H1C4 597 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
UBXN1-217ENST00000534176 MSCO60682 206 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-217ENST00000534176 SLC1A4P43007 532 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 NOVP48745 357 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 STAT2P52630 851 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 PRPF38BQ5VTL8 546 aaKnown RBP18.25■□□□□ 0.51
UBXN1-217ENST00000534176 OLFML2BQ68BL8 750 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-217ENST00000534176 NCAPG2Q86XI2 1143 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 TRIB2Q92519 343 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 HTATIP2Q9BUP3 242 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 FBXO40Q9UH90 709 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
UBXN1-217ENST00000534176 PLXNB2O15031 1838 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 PDE4AP27815 886 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 KCTD2Q14681 263 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 TMEM132BQ14DG7 1078 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 CNNM2Q9H8M5 875 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
UBXN1-217ENST00000534176 PDE4DIPQ5VU43 2346 aa18.24■□□□□ 0.51
UBXN1-217ENST00000534176 TFRCP02786 760 aaKnown RBP18.23■□□□□ 0.51
UBXN1-217ENST00000534176 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
UBXN1-217ENST00000534176 PRKAR2AP13861 404 aaKnown RBP18.23■□□□□ 0.51
UBXN1-217ENST00000534176 ADORA2AP29274 412 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms