RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 NT5C2P49902 561 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 LIG3P49916 1009 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 APBA1Q02410 837 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 POLR3EQ9NVU0 708 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 CTTNBP2NLQ9P2B4 639 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 ASIC3Q9UHC3 531 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
PCDHA4-203ENST00000530339 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 DENND2CQ68D51 928 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 PICK1Q9NRD5 415 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 BACH1O14867 736 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 A1BGP04217 495 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 PHKG2P15735 406 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 UBE3CQ15386 1083 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 PARP2Q9UGN5 583 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 FAM204AQ9H8W3 233 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 RRP15Q9Y3B9 282 aaKnown RBP17.06■□□□□ 0.32
PCDHA4-203ENST00000530339 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 ZBTB38Q8NAP3 1195 aaPredicted RBP17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 PPP6R2O75170 966 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 FEZ2Q9UHY8 353 aaPredicted RBP17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 GPIHBP1Q8IV16 184 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 MCUR1Q96AQ8 359 aa17.05■□□□□ 0.32
PCDHA4-203ENST00000530339 RGS16O15492 202 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 STRN3Q13033 797 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 TAF12Q16514 161 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 MYCBPQ99417 103 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 GKAP1Q5VSY0 366 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 SLC35F6Q8N357 371 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 ERCC3P19447 782 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 CLCN6P51797 869 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 ARHGAP24Q8N264 748 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 PDLIM2Q96JY6 352 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 FGAP02671 866 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 SLC1A4P43007 532 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 ZSCAN10Q96SZ4 725 aaPredicted RBP17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 FAM169AQ9Y6X4 670 aa17.04■□□□□ 0.32
PCDHA4-203ENST00000530339 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 H0YIN7 160 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 SEMA3EO15041 775 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 RNF40O75150 1001 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 CASP14P31944 242 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 PPARDQ03181 441 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 UAP1Q16222 522 aaPredicted RBP17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 CCDC38Q502W7 563 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 IVNS1ABPQ9Y6Y0 642 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 HGSO14964 777 aaPredicted RBP17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 TRIM37O94972 964 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 KRT5P13647 590 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 SLC8A3P57103 927 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 MAP7D1Q3KQU3 841 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 ARHGEF2Q92974 986 aaKnown RBP17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 GSDMAQ96QA5 445 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 VCXQ9H320 206 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 CUEDC2Q9H467 287 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 KIF1BO60333 1816 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 CCT5P48643 541 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 BIRC3Q13489 604 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 LAD1O00515 517 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 GAS8O95995 478 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 TRAPPC10P48553 1259 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 HHATQ5VTY9 493 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 IFNL3Q8IZI9 196 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms