RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 MSANTD4Q8NCY6 345 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 TPCN1Q9ULQ1 816 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 CALUO43852 315 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 ADAMTS2O95450 1211 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 FCHSD1Q86WN1 690 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 PARD6BQ9BYG5 372 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 TRIM6Q9C030 488 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 CDC23Q9UJX2 597 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 GPAA1O43292 621 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 LIN9Q5TKA1 542 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 CADPS2Q86UW7 1296 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC197Q8NCU1 140 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 TMEM87BQ96K49 555 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 TEX13AQ9BXU3 409 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-223ENST00000529986 SHROOM2Q13796 1616 aa8.42□□□□□ -1.06
CTNND1-223ENST00000529986 EDC4Q6P2E9 1401 aaKnown RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 MYO1CO00159 1063 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 NCAPH2Q6IBW4 605 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC51Q96ER9 411 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 LRWD1Q9UFC0 647 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 CASP14P31944 242 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 PDE6BP35913 854 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 TERF2Q15554 542 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 NXNQ6DKJ4 435 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 C11orf57Q6ZUT1 292 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 CABP7Q86V35 215 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 PCDHA7Q9UN72 937 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 ZBTB22O15209 634 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 ECM2O94769 699 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 ADCY8P40145 1251 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 C2orf54Q08AI8 447 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 DCUN1D2Q6PH85 259 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 NEO1Q92859 1461 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 BACH1O14867 736 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 EHHADHQ08426 723 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 TMED1Q13445 227 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 TAF11Q15544 211 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 INTS9Q9NV88 658 aaKnown RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 EPN1Q9Y6I3 576 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-223ENST00000529986 SPATA31E1Q6ZUB1 1445 aa8.41□□□□□ -1.06
CTNND1-223ENST00000529986 EIF4E1BA6NMX2 242 aaKnown RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 CXCR5P32302 372 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 PALM2Q8IXS6 379 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 MRFAP1Q9Y605 127 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 CLIC4Q9Y696 253 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 SYNMO15061 1565 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 E7EWF7 191 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 EXOC5O00471 708 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 THAP12O43422 761 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 GCNT3O95395 438 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 RCN2Q14257 317 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC84Q86UT8 332 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 SCYL3Q8IZE3 742 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC89Q8N998 374 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 DDX39AO00148 427 aaKnown RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 IRS4O14654 1257 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 MRPS25P82663 173 aaKnown RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 HIBCHQ6NVY1 386 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 DACT3Q96B18 629 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 MRPL46Q9H2W6 279 aaKnown RBP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 PARP2Q9UGN5 583 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 NIP7Q9Y221 180 aaKnown RBP eCLIP8.4□□□□□ -1.06
CTNND1-223ENST00000529986 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
CTNND1-223ENST00000529986 GUCY2CP25092 1073 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 LGSNQ5TDP6 509 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 TMEM87AQ8NBN3 555 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 HAUS4Q9H6D7 363 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 EPB41L5Q9HCM4 733 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 EXOC3O60645 756 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 PNMA6AP0CW24 399 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-223ENST00000529986 CA8P35219 290 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 RASSF7Q02833 373 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 TRPC3Q13507 836 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 MCTP2Q6DN12 878 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 LCA5Q86VQ0 697 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 KLHL29Q96CT2 875 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 MBD5Q9P267 1494 aa8.4□□□□□ -1.07
CTNND1-223ENST00000529986 DAPK3O43293 454 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 SUN1O94901 812 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-223ENST00000529986 MYCT1Q8N699 235 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 VCX3AQ9NNX9 186 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 INTUQ9ULD6 942 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 TTLL3Q9Y4R7 772 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 AFG3L2Q9Y4W6 797 aa8.39□□□□□ -1.07
CTNND1-223ENST00000529986 ZMYM3Q14202 1370 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms