RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SRFP11831 508 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 CHMP4BP1P59074 171 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 AUHQ13825 339 aaKnown RBP7.35□□□□□ -1.23
CTR9-204ENST00000529355 MRM1Q6IN84 353 aaKnown RBP7.35□□□□□ -1.23
CTR9-204ENST00000529355 KIAA1211LQ6NV74 962 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 SREK1Q8WXA9 508 aaKnown RBP7.35□□□□□ -1.23
CTR9-204ENST00000529355 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
CTR9-204ENST00000529355 PRDM7Q9NQW5 492 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
CTR9-204ENST00000529355 SUSD2Q9UGT4 822 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 TMEM265A0A087WTH1 108 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 STK10O94804 968 aaKnown RBP7.34□□□□□ -1.23
CTR9-204ENST00000529355 VHLLQ6RSH7 139 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 BRF1Q92994 677 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 HRASLS5Q96KN8 279 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 DHRS1Q96LJ7 313 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 FGD4Q96M96 766 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 GFOD1Q9NXC2 390 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 FBXL21Q9UKT6 434 aa7.34□□□□□ -1.23
CTR9-204ENST00000529355 PRAMEF1O95521 474 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 PRNPP04156 253 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 PRKCQQ04759 706 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 KCNH3Q9ULD8 1083 aa7.33□□□□□ -1.24
CTR9-204ENST00000529355 GJB6O95452 261 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 ESR1P03372 595 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 EPHX1P07099 455 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
CTR9-204ENST00000529355 CLCN7P51798 805 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 ZNF445P59923 1031 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 RNF4P78317 190 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
CTR9-204ENST00000529355 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 PIWIL2Q8TC59 973 aaKnown RBP7.32□□□□□ -1.24
CTR9-204ENST00000529355 HAUS7Q99871 368 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 HDAC8Q9BY41 377 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 PHAXQ9H814 394 aaKnown RBP7.32□□□□□ -1.24
CTR9-204ENST00000529355 PAK6Q9NQU5 681 aaPredicted RBP7.32□□□□□ -1.24
CTR9-204ENST00000529355 VAV3Q9UKW4 847 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 SNX11Q9Y5W9 270 aa7.32□□□□□ -1.24
CTR9-204ENST00000529355 DDAH1O94760 285 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 CD247P20963 164 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 CTSKP43235 329 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 RBL2Q08999 1139 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 RAB33AQ14088 237 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 GAB4Q2WGN9 574 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 TNNI3KQ59H18 835 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 FLCNQ8NFG4 579 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 ADCY4Q8NFM4 1077 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 PMFBP1Q8TBY8 1022 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 KLHL25Q9H0H3 589 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 GP6Q9HCN6 339 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 APEX2Q9UBZ4 518 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
CTR9-204ENST00000529355 IKZF1Q13422 519 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
CTR9-204ENST00000529355 CREG2Q8IUH2 290 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 USHBP1Q8N6Y0 703 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 ZNF513Q8N8E2 541 aaPredicted RBP7.3□□□□□ -1.24
CTR9-204ENST00000529355 DRC1Q96MC2 740 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 KRTAP4-11Q9BYQ6 195 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 CARS2Q9HA77 564 aaKnown RBP7.3□□□□□ -1.24
CTR9-204ENST00000529355 ADAMTS6Q9UKP5 1117 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 SLC12A7Q9Y666 1083 aa7.3□□□□□ -1.24
CTR9-204ENST00000529355 SIGLEC6O43699 453 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
CTR9-204ENST00000529355 DDR2Q16832 855 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 CLEC16AQ2KHT3 1053 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 ANKRD39Q53RE8 183 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 ZPBP2Q6X784 338 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
CTR9-204ENST00000529355 CCDC85CA6NKD9 419 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 WNT11O96014 354 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 IRAK1P51617 712 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 PPP2R5DQ14738 602 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 FXNQ16595 210 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
CTR9-204ENST00000529355 CRTC3Q6UUV7 619 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 CKAP2LQ8IYA6 745 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 ASB11Q8WXH4 323 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 NOL6Q9H6R4 1146 aaKnown RBP7.28□□□□□ -1.24
CTR9-204ENST00000529355 GPATCH2Q9NW75 528 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 DUSP13Q9UII6 198 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 R3HCC1Q9Y3T6 440 aaKnown RBP7.28□□□□□ -1.24
CTR9-204ENST00000529355 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
CTR9-204ENST00000529355 H0Y8X5 98 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 RANGAP1P46060 587 aaPredicted RBP7.27□□□□□ -1.25
CTR9-204ENST00000529355 ZP2Q05996 745 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 ADAT2Q7Z6V5 191 aaKnown RBP7.27□□□□□ -1.25
CTR9-204ENST00000529355 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 ABI1Q8IZP0 508 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms