RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 UBE2FQ969M7 185 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 HRASLS5Q96KN8 279 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 CCDC39Q9UFE4 941 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 VAV3Q9UKW4 847 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 PITPNM2Q9BZ72 1349 aa7.38□□□□□ -1.23
CD44-230ENST00000528922 B2RBV5 119 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 CBFA2T2O43439 604 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 RAB33AQ14088 237 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
CD44-230ENST00000528922 CKAP2LQ8IYA6 745 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
CD44-230ENST00000528922 ATP13A1Q9HD20 1204 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 ST7Q9NRC1 585 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 PCMTD2Q9NV79 361 aa7.37□□□□□ -1.23
CD44-230ENST00000528922 NMIQ13287 307 aaPredicted RBP7.36□□□□□ -1.23
CD44-230ENST00000528922 FXNQ16595 210 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
CD44-230ENST00000528922 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 FAM178BQ8IXR5 827 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 MISP3Q96FF7 219 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 DNAJC2Q99543 621 aaKnown RBP7.36□□□□□ -1.23
CD44-230ENST00000528922 HAUS7Q99871 368 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
CD44-230ENST00000528922 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 FBXL21Q9UKT6 434 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 MINPP1Q9UNW1 487 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 R3HCC1Q9Y3T6 440 aaKnown RBP7.36□□□□□ -1.23
CD44-230ENST00000528922 ZNF451Q9Y4E5 1061 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 PCDHB12Q9Y5F1 795 aa7.36□□□□□ -1.23
CD44-230ENST00000528922 DDAH1O94760 285 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 GAB4Q2WGN9 574 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 TSPYL5Q86VY4 417 aaPredicted RBP7.35□□□□□ -1.23
CD44-230ENST00000528922 KLHL25Q9H0H3 589 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 GPATCH2Q9NW75 528 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 GFOD1Q9NXC2 390 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
CD44-230ENST00000528922 GJB6O95452 261 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 PRAMEF1O95521 474 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 EPHX1P07099 455 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 CD8BP10966 210 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 CD247P20963 164 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 TPP2P29144 1249 aaPredicted RBP7.34□□□□□ -1.23
CD44-230ENST00000528922 NCAPHQ15003 741 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 DDR2Q16832 855 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 MRM1Q6IN84 353 aaKnown RBP7.34□□□□□ -1.23
CD44-230ENST00000528922 VSIG10LQ86VR7 867 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 ASB11Q8WXH4 323 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 HDAC8Q9BY41 377 aa7.34□□□□□ -1.23
CD44-230ENST00000528922 TRIT1Q9H3H1 467 aaKnown RBP7.34□□□□□ -1.23
CD44-230ENST00000528922 SCO2A0A1W2PP80 73 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 ZNF445P59923 1031 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 CLEC16AQ2KHT3 1053 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 ENOX1Q8TC92 643 aaKnown RBP7.33□□□□□ -1.24
CD44-230ENST00000528922 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
CD44-230ENST00000528922 UBXN4Q92575 508 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 BRF1Q92994 677 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 FGD4Q96M96 766 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 TRIM55Q9BYV6 548 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 ASCC2Q9H1I8 757 aaPredicted RBP7.33□□□□□ -1.24
CD44-230ENST00000528922 PAK6Q9NQU5 681 aaPredicted RBP7.33□□□□□ -1.24
CD44-230ENST00000528922 RIMBP3CA6NJZ7 1639 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 RIMBP3BA6NNM3 1639 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 RIMBP3Q9UFD9 1639 aa7.33□□□□□ -1.24
CD44-230ENST00000528922 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
CD44-230ENST00000528922 WNT11O96014 354 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 ESR1P03372 595 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 SERINC3Q13530 473 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 TCEAL1Q15170 157 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 NBPF6Q5VWK0 638 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 HEATR6Q6AI08 1181 aaKnown RBP7.32□□□□□ -1.24
CD44-230ENST00000528922 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
CD44-230ENST00000528922 DAGLBQ8NCG7 672 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 PMFBP1Q8TBY8 1022 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 NBPF4Q96M43 638 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
CD44-230ENST00000528922 CTSKP43235 329 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 IKZF1Q13422 519 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 USHBP1Q8N6Y0 703 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 FLCNQ8NFG4 579 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 TCTN2Q96GX1 697 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 ZFP64Q9NPA5 681 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 PRR13Q9NZ81 148 aa7.31□□□□□ -1.24
CD44-230ENST00000528922 ANGEL1Q9UNK9 670 aaKnown RBP7.31□□□□□ -1.24
CD44-230ENST00000528922 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 MEIS1O00470 390 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
CD44-230ENST00000528922 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 ZNF655Q8N720 491 aaPredicted RBP7.3□□□□□ -1.24
CD44-230ENST00000528922 ADCY4Q8NFM4 1077 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 WHRNQ9P202 907 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 APEX2Q9UBZ4 518 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms