RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 C7orf61Q8IZ16 206 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 GPR62Q9BZJ7 368 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 PCDHB12Q9Y5F1 795 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 MEIS1O00470 390 aa9.03□□□□□ -0.96
PCF11-202ENST00000528336 NFXL1Q6ZNB6 911 aa9.03□□□□□ -0.96
PCF11-202ENST00000528336 CREG2Q8IUH2 290 aa9.03□□□□□ -0.96
PCF11-202ENST00000528336 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
PCF11-202ENST00000528336 SRFP11831 508 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
PCF11-202ENST00000528336 TSPYL5Q86VY4 417 aaPredicted RBP9.02□□□□□ -0.97
PCF11-202ENST00000528336 Q8N3U1 123 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
PCF11-202ENST00000528336 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 SMARCC1Q92922 1105 aaPredicted RBP9.02□□□□□ -0.97
PCF11-202ENST00000528336 PAK6Q9NQU5 681 aaPredicted RBP9.02□□□□□ -0.97
PCF11-202ENST00000528336 ST7Q9NRC1 585 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 ZNF451Q9Y4E5 1061 aa9.02□□□□□ -0.97
PCF11-202ENST00000528336 DDAH1O94760 285 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 ZP2Q05996 745 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 ANGEL2Q5VTE6 544 aaKnown RBP9.01□□□□□ -0.97
PCF11-202ENST00000528336 HEATR6Q6AI08 1181 aaKnown RBP9.01□□□□□ -0.97
PCF11-202ENST00000528336 C6orf15Q6UXA7 325 aaPredicted RBP9.01□□□□□ -0.97
PCF11-202ENST00000528336 WFDC3Q8IUB2 231 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 MICAL1Q8TDZ2 1067 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 DUSP13Q9UII6 198 aa9.01□□□□□ -0.97
PCF11-202ENST00000528336 B2RBV5 119 aa9□□□□□ -0.97
PCF11-202ENST00000528336 SHOXO15266 292 aa9□□□□□ -0.97
PCF11-202ENST00000528336 PLCL1Q15111 1095 aa9□□□□□ -0.97
PCF11-202ENST00000528336 TCEAL1Q15170 157 aa9□□□□□ -0.97
PCF11-202ENST00000528336 FXNQ16595 210 aa9□□□□□ -0.97
PCF11-202ENST00000528336 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
PCF11-202ENST00000528336 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
PCF11-202ENST00000528336 NBPF11Q86T75 865 aa9□□□□□ -0.97
PCF11-202ENST00000528336 CKAP2LQ8IYA6 745 aa9□□□□□ -0.97
PCF11-202ENST00000528336 BRF1Q92994 677 aa9□□□□□ -0.97
PCF11-202ENST00000528336 HAUS7Q99871 368 aa9□□□□□ -0.97
PCF11-202ENST00000528336 CARS2Q9HA77 564 aaKnown RBP9□□□□□ -0.97
PCF11-202ENST00000528336 GP6Q9HCN6 339 aa9□□□□□ -0.97
PCF11-202ENST00000528336 CHST7Q9NS84 486 aa9□□□□□ -0.97
PCF11-202ENST00000528336 KLF4O43474 513 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 SIGLEC6O43699 453 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 EPHX1P07099 455 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 CD247P20963 164 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 GP2P55259 537 aaKnown RBP8.99□□□□□ -0.97
PCF11-202ENST00000528336 GAB4Q2WGN9 574 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 TMPRSS7Q7RTY8 843 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 ADAT2Q7Z6V5 191 aaKnown RBP8.99□□□□□ -0.97
PCF11-202ENST00000528336 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 CELF2-AS1Q8N7Q2 184 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 ENOX1Q8TC92 643 aaKnown RBP8.99□□□□□ -0.97
PCF11-202ENST00000528336 FGD4Q96M96 766 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 DSCC1Q9BVC3 393 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 HDAC8Q9BY41 377 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 TRIM55Q9BYV6 548 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
PCF11-202ENST00000528336 CBFA2T2O43439 604 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 ESR1P03372 595 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 LTKP29376 864 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 NCAPHQ15003 741 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 DAGLBQ8NCG7 672 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 SYTL5Q8TDW5 730 aaPredicted RBP8.98□□□□□ -0.97
PCF11-202ENST00000528336 TCTN2Q96GX1 697 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 PCDHA11Q9Y5I1 949 aa8.98□□□□□ -0.97
PCF11-202ENST00000528336 FUT4P22083 530 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 ZNF445P59923 1031 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 EGR3Q06889 387 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 AGBL5Q8NDL9 886 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 ADCY4Q8NFM4 1077 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 PI4K2BQ8TCG2 481 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 DRC1Q96MC2 740 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 HIRIP3Q9BW71 556 aaPredicted RBP8.97□□□□□ -0.97
PCF11-202ENST00000528336 KLHL25Q9H0H3 589 aa8.97□□□□□ -0.97
PCF11-202ENST00000528336 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 GJB6O95452 261 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 ITGA4P13612 1032 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 RAB33AQ14088 237 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 ABI1Q8IZP0 508 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 USHBP1Q8N6Y0 703 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 ZNF655Q8N720 491 aaPredicted RBP8.96□□□□□ -0.98
PCF11-202ENST00000528336 DNAJC2Q99543 621 aaKnown RBP8.96□□□□□ -0.98
PCF11-202ENST00000528336 GBP3Q9H0R5 595 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 LMCD1Q9NZU5 365 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 SUSD2Q9UGT4 822 aa8.96□□□□□ -0.98
PCF11-202ENST00000528336 OAS3Q9Y6K5 1087 aaKnown RBP8.96□□□□□ -0.98
PCF11-202ENST00000528336 PPP2R5DQ14738 602 aa8.95□□□□□ -0.98
PCF11-202ENST00000528336 PMFBP1Q8TBY8 1022 aa8.95□□□□□ -0.98
PCF11-202ENST00000528336 PPP1R14AQ96A00 147 aa8.95□□□□□ -0.98
PCF11-202ENST00000528336 NOL6Q9H6R4 1146 aaKnown RBP8.95□□□□□ -0.98
PCF11-202ENST00000528336 SLAMF8Q9P0V8 285 aa8.95□□□□□ -0.98
PCF11-202ENST00000528336 SUGT1Q9Y2Z0 365 aa8.95□□□□□ -0.98
PCF11-202ENST00000528336 ANKRD34BA5PLL1 514 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 U2SURPO15042 1029 aaKnown RBP8.94□□□□□ -0.98
PCF11-202ENST00000528336 PPM1BO75688 479 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 SYPP08247 313 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 RBL2Q08999 1139 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 DDR2Q16832 855 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 CRTC3Q6UUV7 619 aa8.94□□□□□ -0.98
PCF11-202ENST00000528336 FIBCD1Q8N539 461 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms