RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 GREM2Q9H772 168 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 LUC7L2Q9Y383 392 aaKnown RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 ANO9A1A5B4 782 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 H7C1D1 291 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 RUBCNQ92622 972 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 ZKSCAN3Q9BRR0 538 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 REXO2Q9Y3B8 237 aaKnown RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 XDHP47989 1333 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 CDC25AP30304 524 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 IRX3P78415 501 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 ATP2C1P98194 919 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
SPIDR-225ENST00000524141 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
SPIDR-225ENST00000524141 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 RNF225M0QZC1 329 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 CYLC1P35663 651 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 E2F4Q16254 413 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 TADA2BQ86TJ2 420 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 MMS19Q96T76 1030 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 CHP1Q99653 195 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 TACC3Q9Y6A5 838 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 BCORQ6W2J9 1755 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 LGALS16A8MUM7 142 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 PRPF3O43395 683 aaKnown RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 GBP6Q6ZN66 633 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 ESR2Q92731 530 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 JAKMIP2Q96AA8 810 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 SLC4A4Q9Y6R1 1079 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
SPIDR-225ENST00000524141 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-225ENST00000524141 TTC26A0AVF1 554 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 FAM205CA6NFA0 338 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 ENC1O14682 589 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 ATP1A1P05023 1023 aaKnown RBP11.52□□□□□ -0.56
SPIDR-225ENST00000524141 SLC5A1P13866 664 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 SEMA3FQ13275 785 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 CHRNA2Q15822 529 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.56
SPIDR-225ENST00000524141 MB21D1Q8N884 522 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 DEF6Q9H4E7 631 aa11.52□□□□□ -0.56
SPIDR-225ENST00000524141 GOLGA6CA6NDK9 693 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 GOLGA6DP0CG33 693 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 GGCXP38435 758 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 PTGDRQ13258 359 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 PKN1Q16512 942 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 CCDC170Q8IYT3 715 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 FNBP4Q8N3X1 1017 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-225ENST00000524141 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-225ENST00000524141 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
SPIDR-225ENST00000524141 GOLGA6AQ9NYA3 693 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 FAM184BQ9ULE4 1060 aa11.52□□□□□ -0.57
SPIDR-225ENST00000524141 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 A6NNZ2 444 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
SPIDR-225ENST00000524141 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
SPIDR-225ENST00000524141 CALM1P0DP23 149 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 CALM2P0DP24 149 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 CALM3P0DP25 149 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 FGFR2P21802 821 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 HERVK_113P62684 666 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 SEC23AQ15436 765 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 ZNF174Q15697 407 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 MEA1Q16626 185 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 TUBB8Q3ZCM7 444 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 CCNI2Q6ZMN8 369 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-225ENST00000524141 SUGP1Q8IWZ8 645 aaKnown RBP11.51□□□□□ -0.57
SPIDR-225ENST00000524141 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 TNKSO95271 1327 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 PDS5AQ29RF7 1337 aaKnown RBP11.51□□□□□ -0.57
SPIDR-225ENST00000524141 LRP5O75197 1615 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
SPIDR-225ENST00000524141 PPFIA1Q13136 1202 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms