RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 NYAP2Q9P242 653 aa17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 BTBD18B2RXH4 712 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 NR5A1Q13285 461 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 TRIM29Q14134 588 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 MKL1Q969V6 931 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 F5H6K3 240 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 KLRC3Q07444 240 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 DGKZQ13574 1117 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SLFN13Q68D06 897 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 WASF1Q92558 559 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ZKSCAN4Q969J2 545 aaPredicted RBP17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 PIGSQ96S52 555 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
CSGALNACT1-211ENST00000522854 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 GOLGA6L22H0YM25 854 aa17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 TRAK2O60296 914 aa17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 MMP1P03956 469 aa17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SCG2P13521 617 aa17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ZSCAN16Q9H4T2 348 aaPredicted RBP17.41■□□□□ 0.38
CSGALNACT1-211ENST00000522854 POTECB2RU33 542 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 NDUFB10O96000 172 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 PDIA4P13667 645 aaKnown RBP17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 EPHX2P34913 555 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SLC1A4P43007 532 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 GNAQP50148 359 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SNAP25P60880 206 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
CSGALNACT1-211ENST00000522854 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 KRT85P78386 507 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 NPY5RQ15761 445 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ASPRV1Q53RT3 343 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 EARS2Q5JPH6 523 aaKnown RBP17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GPT2Q8TD30 523 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 WRNIP1Q96S55 665 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SPZ1Q9BXG8 430 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
CSGALNACT1-211ENST00000522854 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
CSGALNACT1-211ENST00000522854 JMJD4Q9H9V9 463 aa17.38■□□□□ 0.37
CSGALNACT1-211ENST00000522854 CLIC4Q9Y696 253 aa17.38■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ASNSP08243 561 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 KRT26Q7Z3Y9 468 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 RIOX1Q9H6W3 641 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 TMX2Q9Y320 296 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 PPP1R11O60927 126 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 LEO1Q8WVC0 666 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 COA7Q96BR5 231 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 LZTS2Q9BRK4 669 aa17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-211ENST00000522854 DOCK1Q14185 1865 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 TMEM232C9JQI7 657 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 STXBP3O00186 592 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 NLRP5P59047 1200 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SPATA32Q96LK8 384 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SMCHD1A6NHR9 2005 aa17.36■□□□□ 0.37
CSGALNACT1-211ENST00000522854 CTNND1O60716 968 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 DCAF15Q66K64 600 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 DCAF4Q8WV16 495 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 PITPNM2Q9BZ72 1349 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 WNT7AO00755 349 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 XBP1P17861 261 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 BRAPQ7Z569 592 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms