RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMEM265A0A087WTH1 108 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 PRR33A8MZF0 331 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 B2RBV5 119 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 CBFA2T2O43439 604 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 SUSD5O60279 629 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 LRRN2O75325 713 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 PPM1BO75688 479 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 SRFP11831 508 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 ITGA4P13612 1032 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 GRIK1P39086 918 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 IFRD2Q12894 506 aaPredicted RBP6.79□□□□□ -1.32
SQLE-202ENST00000518604 BMS1Q14692 1282 aaKnown RBP6.79□□□□□ -1.32
SQLE-202ENST00000518604 IFI16Q16666 785 aaKnown RBP6.79□□□□□ -1.32
SQLE-202ENST00000518604 NKPD1Q17RQ9 610 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 MRM1Q6IN84 353 aaKnown RBP6.79□□□□□ -1.32
SQLE-202ENST00000518604 THAP5Q7Z6K1 395 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 PRDM14Q9GZV8 571 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 GPATCH2Q9NW75 528 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 SUSD2Q9UGT4 822 aa6.79□□□□□ -1.32
SQLE-202ENST00000518604 IQCA1LA6NCM1 817 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 SHOXO15266 292 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 EPHX1P07099 455 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
SQLE-202ENST00000518604 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 SYTL5Q8TDW5 730 aaPredicted RBP6.78□□□□□ -1.32
SQLE-202ENST00000518604 SGSM3Q96HU1 749 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 RCC1LQ96I51 464 aaKnown RBP6.78□□□□□ -1.32
SQLE-202ENST00000518604 RNF112Q9ULX5 631 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
SQLE-202ENST00000518604 ZNF451Q9Y4E5 1061 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 ST14Q9Y5Y6 855 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 FHOD1Q9Y613 1164 aa6.78□□□□□ -1.32
SQLE-202ENST00000518604 FAM221BA6H8Z2 402 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 AGRPO00253 132 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 SIGLEC6O43699 453 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 NMIQ13287 307 aaPredicted RBP6.77□□□□□ -1.33
SQLE-202ENST00000518604 ADAT2Q7Z6V5 191 aaKnown RBP6.77□□□□□ -1.33
SQLE-202ENST00000518604 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 DAGLBQ8NCG7 672 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 DUSP15Q9H1R2 295 aaPredicted RBP6.77□□□□□ -1.33
SQLE-202ENST00000518604 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 ZC3H7BQ9UGR2 993 aaKnown RBP6.77□□□□□ -1.33
SQLE-202ENST00000518604 PLAGL2Q9UPG8 496 aa6.77□□□□□ -1.33
SQLE-202ENST00000518604 CCDC85CA6NKD9 419 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 COBLO75128 1261 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 TGFB1P01137 390 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 ITIH2P19823 946 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 ZNF445P59923 1031 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 CLEC16AQ2KHT3 1053 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 MTERF2Q49AM1 385 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 POMZP3Q6PJE2 187 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 ARHGEF39Q8N4T4 335 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 CRACR2BQ8N4Y2 399 aaPredicted RBP6.76□□□□□ -1.33
SQLE-202ENST00000518604 ZNF655Q8N720 491 aaPredicted RBP6.76□□□□□ -1.33
SQLE-202ENST00000518604 PIF1Q9H611 641 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 CHST7Q9NS84 486 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 VAV3Q9UKW4 847 aa6.76□□□□□ -1.33
SQLE-202ENST00000518604 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 PRKCQQ04759 706 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 SNW1Q13573 536 aaKnown RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 SLC10A6Q3KNW5 377 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 SV2CQ496J9 727 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 TMC3Q7Z5M5 1100 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 TSPYL5Q86VY4 417 aaPredicted RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 LRRC47Q8N1G4 583 aaKnown RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 PLD6Q8N2A8 252 aaKnown RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 ZNF513Q8N8E2 541 aaPredicted RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 BVESQ8NE79 360 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 GFOD1Q9NXC2 390 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 SF3B6Q9Y3B4 125 aaKnown RBP6.75□□□□□ -1.33
SQLE-202ENST00000518604 U3KQE9 123 aa6.75□□□□□ -1.33
SQLE-202ENST00000518604 GSNP06396 782 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 LONRF2Q1L5Z9 754 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 MSMPQ1L6U9 139 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 CDKAL1Q5VV42 579 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 Q8N3U1 123 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 ASB11Q8WXH4 323 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 FGD4Q96M96 766 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 HSPA12BQ96MM6 686 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 DNAJC7Q99615 494 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 DSCC1Q9BVC3 393 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 HDAC8Q9BY41 377 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 SEMA3GQ9NS98 782 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 ZMYM5Q9UJ78 669 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 SUGT1Q9Y2Z0 365 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 PITPNM2Q9BZ72 1349 aa6.74□□□□□ -1.33
SQLE-202ENST00000518604 PRAMEF1O95521 474 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
SQLE-202ENST00000518604 GRB10Q13322 594 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 GAB4Q2WGN9 574 aa6.73□□□□□ -1.33
SQLE-202ENST00000518604 ZC3H12BQ5HYM0 836 aaKnown RBP6.73□□□□□ -1.33
SQLE-202ENST00000518604 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms