RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 ZNF512BQ96KM6 892 aaPredicted RBP3.54□□□□□ -1.84
RNF4-219ENST00000513450 Q96M66 194 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 DEPDC7Q96QD5 511 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 SRPK1Q96SB4 655 aaKnown RBP3.54□□□□□ -1.84
RNF4-219ENST00000513450 APBA2Q99767 749 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 GPR62Q9BZJ7 368 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 GBP3Q9H0R5 595 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 ASCC2Q9H1I8 757 aaPredicted RBP3.54□□□□□ -1.84
RNF4-219ENST00000513450 SNTG2Q9NY99 539 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 WHRNQ9P202 907 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 PCDHB12Q9Y5F1 795 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 SNX11Q9Y5W9 270 aa3.54□□□□□ -1.84
RNF4-219ENST00000513450 PRR33A8MZF0 331 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 FAM155AB1AL88 458 aaPredicted RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 SHOXO15266 292 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 CBFA2T2O43439 604 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 SUSD5O60279 629 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 LRRN2O75325 713 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 PPM1BO75688 479 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 EPHX1P07099 455 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 SRFP11831 508 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 GRIK1P39086 918 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 BMS1Q14692 1282 aaKnown RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 IFI16Q16666 785 aaKnown RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 NKPD1Q17RQ9 610 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 DCAF15Q66K64 600 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 MRM1Q6IN84 353 aaKnown RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 INTS5Q6P9B9 1019 aaKnown RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 THAP5Q7Z6K1 395 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 NETO1Q8TDF5 533 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 PRDM14Q9GZV8 571 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 KLHL25Q9H0H3 589 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 TRIT1Q9H3H1 467 aaKnown RBP3.53□□□□□ -1.84
RNF4-219ENST00000513450 LRRC4CQ9HCJ2 640 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 GP6Q9HCN6 339 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 FBXL21Q9UKT6 434 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 ZNF451Q9Y4E5 1061 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 ST14Q9Y5Y6 855 aa3.53□□□□□ -1.84
RNF4-219ENST00000513450 TMEM265A0A087WTH1 108 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 IQCA1LA6NCM1 817 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 AGRPO00253 132 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 SIGLEC6O43699 453 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 TGFB1P01137 390 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 ITGA4P13612 1032 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 ITIH2P19823 946 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 IFRD2Q12894 506 aaPredicted RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 NMIQ13287 307 aaPredicted RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 MTERF2Q49AM1 385 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 NOL9Q5SY16 702 aaKnown RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 ADAT2Q7Z6V5 191 aaKnown RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 SPACA3Q8IXA5 215 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 FAM181AQ8N9Y4 354 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 SYTL5Q8TDW5 730 aaPredicted RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 MISP3Q96FF7 219 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 SGSM3Q96HU1 749 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 RCC1LQ96I51 464 aaKnown RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 PIF1Q9H611 641 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 CHST7Q9NS84 486 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 FAM86C1Q9NVL1 165 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 GPATCH2Q9NW75 528 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 ZC3H7BQ9UGR2 993 aaKnown RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 SUSD2Q9UGT4 822 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 RNF112Q9ULX5 631 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 PLAGL2Q9UPG8 496 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 DIS3Q9Y2L1 958 aaKnown RBP3.52□□□□□ -1.85
RNF4-219ENST00000513450 FHOD1Q9Y613 1164 aa3.52□□□□□ -1.85
RNF4-219ENST00000513450 FAM221BA6H8Z2 402 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 CCDC85CA6NKD9 419 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 NOP56O00567 594 aaKnown RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 PRAMEF1O95521 474 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 ZNF445P59923 1031 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 PRKCQQ04759 706 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 MSMPQ1L6U9 139 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 CLEC16AQ2KHT3 1053 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 SLC10A6Q3KNW5 377 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 SV2CQ496J9 727 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 POMZP3Q6PJE2 187 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 TMC3Q7Z5M5 1100 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 LRRC47Q8N1G4 583 aaKnown RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 PLD6Q8N2A8 252 aaKnown RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 ARHGEF39Q8N4T4 335 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 CRACR2BQ8N4Y2 399 aaPredicted RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 ZNF655Q8N720 491 aaPredicted RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 DAGLBQ8NCG7 672 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 BVESQ8NE79 360 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 ASB11Q8WXH4 323 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 HRASLS5Q96KN8 279 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 HSPA12BQ96MM6 686 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 HDAC8Q9BY41 377 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 DUSP15Q9H1R2 295 aaPredicted RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 GFOD1Q9NXC2 390 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 VAV3Q9UKW4 847 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 SF3B6Q9Y3B4 125 aaKnown RBP3.51□□□□□ -1.85
RNF4-219ENST00000513450 U3KQE9 123 aa3.51□□□□□ -1.85
RNF4-219ENST00000513450 H3BS24 57 aa3.5□□□□□ -1.85
RNF4-219ENST00000513450 GSNP06396 782 aa3.5□□□□□ -1.85
RNF4-219ENST00000513450 HOXA10P31260 410 aaPredicted RBP3.5□□□□□ -1.85
RNF4-219ENST00000513450 SSRP1Q08945 709 aaKnown RBP3.5□□□□□ -1.85
RNF4-219ENST00000513450 GRB10Q13322 594 aa3.5□□□□□ -1.85
RNF4-219ENST00000513450 SNW1Q13573 536 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms