RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 USP17L21D6R901 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 F6X3S4 739 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
CCSER1-208ENST00000509109 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 SLC4A10Q6U841 1118 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 APOBEC3FQ8IUX4 373 aaKnown RBP9.35□□□□□ -0.91
CCSER1-208ENST00000509109 PHACTR1Q9C0D0 580 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 SAGE1Q9NXZ1 904 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 PTPRCP08575 1304 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 E9PSI1 815 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 RFX1P22670 979 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 AMPD1P23109 780 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 FOXO4P98177 505 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 GRIN2CQ14957 1233 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 LDHAL6AQ6ZMR3 332 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 C15orf52Q6ZUT6 534 aaKnown RBP9.34□□□□□ -0.91
CCSER1-208ENST00000509109 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-208ENST00000509109 HSH2DQ96JZ2 352 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 CNNM1Q9NRU3 951 aa9.34□□□□□ -0.91
CCSER1-208ENST00000509109 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 WNT10BO00744 389 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 MYO1BO43795 1136 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 ARAFP10398 606 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 PCBP4P57723 403 aaKnown RBP9.33□□□□□ -0.92
CCSER1-208ENST00000509109 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 KIAA0825Q8IV33 1275 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 CD209Q9NNX6 404 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 KLF15Q9UIH9 416 aa9.33□□□□□ -0.92
CCSER1-208ENST00000509109 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-208ENST00000509109 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 PHF20L1A8MW92 1017 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 FAM155AB1AL88 458 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-208ENST00000509109 SASH1O94885 1247 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 KLRK1P26718 216 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
CCSER1-208ENST00000509109 NBPF9Q3BBW0 867 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 TXNRD3Q86VQ6 643 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 ANKMY2Q8IV38 441 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 PPP2R3BQ9Y5P8 575 aa9.32□□□□□ -0.92
CCSER1-208ENST00000509109 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 MYH13Q9UKX3 1938 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 WTIPA6NIX2 430 aaPredicted RBP9.31□□□□□ -0.92
CCSER1-208ENST00000509109 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 EFSO43281 561 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 TAF5LO75529 589 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 IL1R1P14778 569 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 KIF23Q02241 960 aaPredicted RBP9.31□□□□□ -0.92
CCSER1-208ENST00000509109 SFSWAPQ12872 951 aaKnown RBP9.31□□□□□ -0.92
CCSER1-208ENST00000509109 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
CCSER1-208ENST00000509109 DLGAP5Q15398 846 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 UTYO14607 1347 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
CCSER1-208ENST00000509109 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
CCSER1-208ENST00000509109 EPXP11678 715 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 ALDH1L2Q3SY69 923 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 C1orf53Q5VUE5 145 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 ARMC9Q7Z3E5 817 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 VPS37DQ86XT2 251 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 ALDH16A1Q8IZ83 802 aa9.3□□□□□ -0.92
CCSER1-208ENST00000509109 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
CCSER1-208ENST00000509109 LAMB1P07942 1786 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 PLIN1O60240 522 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
CCSER1-208ENST00000509109 ADH6P28332 368 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 HIBADHP31937 336 aaKnown RBP9.29□□□□□ -0.92
CCSER1-208ENST00000509109 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
CCSER1-208ENST00000509109 EPHA10Q5JZY3 1008 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 SUCLG2Q96I99 432 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 BTBD6Q96KE9 485 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 BICC1Q9H694 974 aaKnown RBP9.29□□□□□ -0.92
CCSER1-208ENST00000509109 SMC4Q9NTJ3 1288 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 HDAC5Q9UQL6 1122 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
CCSER1-208ENST00000509109 FAM205AQ6ZU69 1335 aa9.29□□□□□ -0.92
CCSER1-208ENST00000509109 UNCXA6NJT0 531 aa9.28□□□□□ -0.92
CCSER1-208ENST00000509109 FRAT2O75474 233 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms