RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 RUFY4Q6ZNE9 571 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 LSRQ86X29 649 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 MKRN2Q9H000 416 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 SUCOQ9UBS9 1254 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 EFR3BQ9Y2G0 817 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 ZNF281Q9Y2X9 895 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 SIGLEC6O43699 453 aa8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 PRAMEF1O95521 474 aa8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 ZYXQ15942 572 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 ZNF655Q8N720 491 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 TCTN2Q96GX1 697 aa8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 LIN37Q96GY3 246 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 EBF1Q9UH73 591 aa8.91□□□□□ -0.98
TOPBP1-206ENST00000508524 C9IYK1 514 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 RAC2P15153 192 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 GUCY2CP25092 1073 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 PPFIBP1Q86W92 1011 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 TGIF2Q9GZN2 237 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
TOPBP1-206ENST00000508524 SHOXO15266 292 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 PMS1P54277 932 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 AUHQ13825 339 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 RNF111Q6ZNA4 994 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 MYLIPQ8WY64 445 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 DHRS1Q96LJ7 313 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 FOXP3Q9BZS1 431 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 ACBD3Q9H3P7 528 aa8.89□□□□□ -0.99
TOPBP1-206ENST00000508524 TRHRP34981 398 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 UNC5AQ6ZN44 842 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 DHX38Q92620 1227 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 G6PC3Q9BUM1 346 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 GFOD1Q9NXC2 390 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 TCFL5Q9UL49 500 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 PCDHB12Q9Y5F1 795 aa8.88□□□□□ -0.99
TOPBP1-206ENST00000508524 TMEM82A0PJX8 343 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 LRRC10BA6NIK2 292 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 GIPRP48546 466 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 ZNF648Q5T619 568 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 TDRD10Q5VZ19 366 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 LINC00116Q8NCU8 138 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 LINC01599Q8WXQ3 324 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 CHST7Q9NS84 486 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 FAM53CQ9NYF3 392 aa8.87□□□□□ -0.99
TOPBP1-206ENST00000508524 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 PCBP3P57721 371 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 MLANAQ16655 118 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 TIGD5Q53EQ6 642 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 C7orf61Q8IZ16 206 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 OXR1Q8N573 874 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 C19orf44Q9H6X5 657 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 PRR13Q9NZ81 148 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 FBXL21Q9UKT6 434 aa8.86□□□□□ -0.99
TOPBP1-206ENST00000508524 LTBP3Q9NS15 1303 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 FITM1A5D6W6 292 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 C8AP07357 584 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 SYPP08247 313 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 CTSKP43235 329 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 EIF6P56537 245 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 DUSP4Q13115 394 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 NR0B2Q15466 257 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 SMARCC1Q92922 1105 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 SYTL4Q96C24 671 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 CRBNQ96SW2 442 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 RNF32Q9H0A6 362 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 CCSER2Q9H7U1 834 aa8.85□□□□□ -0.99
TOPBP1-206ENST00000508524 FARP2O94887 1054 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 RPL10P27635 214 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 AXDND1Q5T1B0 1012 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 MPZL3Q6UWV2 235 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 PRR23BQ6ZRT6 265 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 WAPLQ7Z5K2 1190 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 LILRA2Q8N149 483 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 ANKS4BQ8N8V4 417 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 SHDQ96IW2 340 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 ZNF214Q9UL59 606 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 INPP5FQ9Y2H2 1132 aa8.84□□□□□ -0.99
TOPBP1-206ENST00000508524 MEIS1O00470 390 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 FKTNO75072 461 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 CHRNEQ04844 493 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 LCE3BQ5TA77 95 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 ZPBP2Q6X784 338 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 C19orf47Q8N9M1 422 aaKnown RBP8.83□□□□□ -1
TOPBP1-206ENST00000508524 SEC16BQ96JE7 1060 aa8.83□□□□□ -1
TOPBP1-206ENST00000508524 NOTOA8MTQ0 251 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 EFEMP2O95967 443 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 BMP8BP34820 402 aa8.82□□□□□ -1
TOPBP1-206ENST00000508524 CRTC3Q6UUV7 619 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms