RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 DCAF4Q8WV16 495 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 ZSCAN31Q96LW9 406 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 ZCCHC17Q9NP64 241 aaKnown RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 SH2B1Q9NRF2 756 aaPredicted RBP10.11□□□□□ -0.79
USP46-207ENST00000508499 FZD1Q9UP38 647 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 ZHX2Q9Y6X8 837 aa10.11□□□□□ -0.79
USP46-207ENST00000508499 CCDC69A6NI79 296 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 F5H6K3 240 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 UBE2Q2LH0YL09 131 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 HUNKP57058 714 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 INHBEP58166 350 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 KLRC3Q07444 240 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 ASPRV1Q53RT3 343 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 GPATCH4Q5T3I0 446 aaKnown RBP10.1□□□□□ -0.79
USP46-207ENST00000508499 SPRYD7Q5W111 196 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 RGMBQ6NW40 437 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 CATIPQ7Z7H3 387 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 BRF1Q92994 677 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 OPTNQ96CV9 577 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 ZNF408Q9H9D4 720 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 CLIP2Q9UDT6 1046 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 SLC45A1Q9Y2W3 748 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 MYPNQ86TC9 1320 aa10.1□□□□□ -0.79
USP46-207ENST00000508499 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 PALM3A6NDB9 673 aaPredicted RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 IRF6O14896 467 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 WDR46O15213 610 aaKnown RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 PFKFB2O60825 505 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 SLC10A3P09131 477 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 PDHBP11177 359 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 PDIA3P30101 505 aaKnown RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 KIF5BP33176 963 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 ECE1P42892 770 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 FGD1P98174 961 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 SPP2Q13103 211 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 PRKG1Q13976 671 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 USP17L2Q6R6M4 530 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 WNK4Q96J92 1243 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 MS4A4AQ96JQ5 239 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 ELP3Q9H9T3 547 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
USP46-207ENST00000508499 COL11A1P12107 1806 aaPredicted RBP10.09□□□□□ -0.79
USP46-207ENST00000508499 FAM155AB1AL88 458 aaPredicted RBP10.08□□□□□ -0.8
USP46-207ENST00000508499 ZBTB43O43298 467 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
USP46-207ENST00000508499 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
USP46-207ENST00000508499 GJA5P36382 358 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 GNAQP50148 359 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 GTF2A2P52657 109 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 ZNF543Q08ER8 600 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 SNAPC2Q13487 334 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 MOGSQ13724 837 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 GRM4Q14833 912 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 RASAL3Q86YV0 1011 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 CLEC10AQ8IUN9 316 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 FANCBQ8NB91 859 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 TCEANC2Q96MN5 208 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
USP46-207ENST00000508499 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 TPCN1Q9ULQ1 816 aa10.08□□□□□ -0.8
USP46-207ENST00000508499 KLF18A0A0U1RQI7 1052 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
USP46-207ENST00000508499 NDUFB10O96000 172 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 FDX1P10109 184 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 CETPP11597 493 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 MTMR2Q13614 643 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 CUL4AQ13619 759 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 LBX2Q6XYB7 198 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 NFXL1Q6ZNB6 911 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 GTF3C6Q969F1 213 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 FEZ1Q99689 392 aa10.07□□□□□ -0.8
USP46-207ENST00000508499 LLPHQ9BRT6 129 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms