RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 HTR3BO95264 441 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 BMP7P18075 431 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 CHMP4BP1P59074 171 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 XPCQ01831 940 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 SNX17Q15036 470 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 ZNF326Q5BKZ1 582 aaKnown RBP5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 SIRT2Q8IXJ6 389 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 PHACTR4Q8IZ21 702 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 SHISA4Q96DD7 197 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 C20orf173Q96LM9 149 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 ZCCHC4Q9H5U6 513 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 GCM1Q9NP62 436 aa5.09□□□□□ -1.59
HMGB3P15-201ENST00000507326 PRR36Q9H6K5 1346 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 DNAJA2O60884 412 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 GBP2P32456 591 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 FAM160A1Q05DH4 1040 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 LINC01599Q8WXQ3 324 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 RHOVQ96L33 236 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 G6PC3Q9BUM1 346 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 ASCC2Q9H1I8 757 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 PARD6AQ9NPB6 346 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 KCTD3Q9Y597 815 aa5.08□□□□□ -1.6
HMGB3P15-201ENST00000507326 OR14I1A6ND48 311 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 USP2O75604 605 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 EFEMP2O95967 443 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 RPL10P27635 214 aaKnown RBP5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 GBP1P32455 592 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 NMIQ13287 307 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 SSPNQ14714 243 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 SNAP47Q5SQN1 464 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 ADGRF1Q5T601 910 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 TMC4Q7Z404 712 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 WAPLQ7Z5K2 1190 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 FBXO27Q8NI29 283 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 TMEM74Q96NL1 305 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 FOXP3Q9BZS1 431 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 ZMYM5Q9UJ78 669 aa5.07□□□□□ -1.6
HMGB3P15-201ENST00000507326 NOTOA8MTQ0 251 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 MINDY4BA8MYZ0 360 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 TLR3O15455 904 aaKnown RBP5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 CCDC27Q2M243 656 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 ZNF385BQ569K4 471 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 TCERG1LQ5VWI1 586 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 RNF111Q6ZNA4 994 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 REC114Q7Z4M0 266 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 NLRX1Q86UT6 975 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 GOLM1Q8NBJ4 401 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 SYTL5Q8TDW5 730 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 RELTQ969Z4 430 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 VWCEQ96DN2 955 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 ZNF281Q9Y2X9 895 aa5.06□□□□□ -1.6
HMGB3P15-201ENST00000507326 ADAMTS20P59510 1910 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 SSU72P8A0A1W2PR75 194 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 RFXAPO00287 272 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 RGS13O14921 159 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 SRSF3P84103 164 aaKnown RBP5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 MPP2Q14168 576 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 ARSHQ5FYA8 562 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 SND1Q7KZF4 910 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 ANKRD13AQ8IZ07 590 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 USHBP1Q8N6Y0 703 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 CRELD1Q96HD1 420 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 RSRP1Q9BUV0 290 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
HMGB3P15-201ENST00000507326 A0A0G2JLL6 359 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 HMGB1P1B2RPK0 211 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 NRDCO43847 1150 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 TRIM13O60858 407 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 FKTNO75072 461 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 UBOX5O94941 541 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 RAG1P15918 1043 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 PI3P19957 117 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 SDHBP21912 280 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 RNF4P78317 190 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 PWP1Q13610 501 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 ZPBP2Q6X784 338 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 CEP128Q6ZU80 1094 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 DHX37Q8IY37 1157 aaKnown RBP5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 ENOX1Q8TC92 643 aaKnown RBP5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 PANK1Q8TE04 598 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 ZNF428Q96B54 188 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 TCTN2Q96GX1 697 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 MAP6Q96JE9 813 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 KCNC2Q96PR1 638 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 VTI1BQ9UEU0 232 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 MBD1Q9UIS9 605 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 TCFL5Q9UL49 500 aa5.04□□□□□ -1.6
HMGB3P15-201ENST00000507326 TMEM82A0PJX8 343 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SLC22A31A6NKX4 558 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SORBS3O60504 671 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SYPP08247 313 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 GARTP22102 1010 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 KIR2DL1P43626 348 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms