RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 CBFA2T2O43439 604 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 KLF4O43474 513 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 PRAMEF1O95521 474 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
COPS4-203ENST00000504274 VHLLQ6RSH7 139 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 HDAC8Q9BY41 377 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 TRIT1Q9H3H1 467 aaKnown RBP8.05□□□□□ -1.12
COPS4-203ENST00000504274 GPATCH2Q9NW75 528 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 PCDHB12Q9Y5F1 795 aa8.05□□□□□ -1.12
COPS4-203ENST00000504274 SIGLEC6O43699 453 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPS4-203ENST00000504274 GP2P55259 537 aaKnown RBP8.04□□□□□ -1.12
COPS4-203ENST00000504274 CLEC16AQ2KHT3 1053 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 BBS9Q3SYG4 887 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 KIAA1211LQ6NV74 962 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 C6orf15Q6UXA7 325 aaPredicted RBP8.04□□□□□ -1.12
COPS4-203ENST00000504274 CREG2Q8IUH2 290 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 TP53INP2Q8IXH6 220 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 CELF2-AS1Q8N7Q2 184 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 SMARCC1Q92922 1105 aaPredicted RBP8.04□□□□□ -1.12
COPS4-203ENST00000504274 CARS2Q9HA77 564 aaKnown RBP8.04□□□□□ -1.12
COPS4-203ENST00000504274 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 SUSD2Q9UGT4 822 aa8.04□□□□□ -1.12
COPS4-203ENST00000504274 OAS3Q9Y6K5 1087 aaKnown RBP8.04□□□□□ -1.12
COPS4-203ENST00000504274 MEIS1O00470 390 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 STK10O94804 968 aaKnown RBP8.03□□□□□ -1.12
COPS4-203ENST00000504274 CD247P20963 164 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 FUT4P22083 530 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 ZP2Q05996 745 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 ANKRD39Q53RE8 183 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 ANGEL2Q5VTE6 544 aaKnown RBP8.03□□□□□ -1.12
COPS4-203ENST00000504274 ABI1Q8IZP0 508 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 HAUS7Q99871 368 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 ADAMTS6Q9UKP5 1117 aa8.03□□□□□ -1.12
COPS4-203ENST00000504274 EPHX1P07099 455 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 ZNF445P59923 1031 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 FAM178BQ8IXR5 827 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
COPS4-203ENST00000504274 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
COPS4-203ENST00000504274 BRF1Q92994 677 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 TCTN2Q96GX1 697 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 KLHL25Q9H0H3 589 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 ASCC2Q9H1I8 757 aaPredicted RBP8.02□□□□□ -1.13
COPS4-203ENST00000504274 ST7Q9NRC1 585 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 CHST7Q9NS84 486 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 DUSP13Q9UII6 198 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 PCDHA11Q9Y5I1 949 aa8.02□□□□□ -1.13
COPS4-203ENST00000504274 CTSKP43235 329 aa8.01□□□□□ -1.13
COPS4-203ENST00000504274 PLCL1Q15111 1095 aa8.01□□□□□ -1.13
COPS4-203ENST00000504274 MRM1Q6IN84 353 aaKnown RBP8.01□□□□□ -1.13
COPS4-203ENST00000504274 USHBP1Q8N6Y0 703 aa8.01□□□□□ -1.13
COPS4-203ENST00000504274 DAGLBQ8NCG7 672 aa8.01□□□□□ -1.13
COPS4-203ENST00000504274 ENOX1Q8TC92 643 aaKnown RBP8.01□□□□□ -1.13
COPS4-203ENST00000504274 FGD4Q96M96 766 aa8.01□□□□□ -1.13
COPS4-203ENST00000504274 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
COPS4-203ENST00000504274 GJB6O95452 261 aa8□□□□□ -1.13
COPS4-203ENST00000504274 SF3A1Q15459 793 aaKnown RBP8□□□□□ -1.13
COPS4-203ENST00000504274 FXNQ16595 210 aa8□□□□□ -1.13
COPS4-203ENST00000504274 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
COPS4-203ENST00000504274 NBPF11Q86T75 865 aa8□□□□□ -1.13
COPS4-203ENST00000504274 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
COPS4-203ENST00000504274 PPP1R1BQ9UD71 204 aaPredicted RBP8□□□□□ -1.13
COPS4-203ENST00000504274 DDAH1O94760 285 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 LTKP29376 864 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 EGR3Q06889 387 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 RAB33AQ14088 237 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 NCAPHQ15003 741 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 ZNF513Q8N8E2 541 aaPredicted RBP7.99□□□□□ -1.13
COPS4-203ENST00000504274 ADCY4Q8NFM4 1077 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 PRR13Q9NZ81 148 aa7.99□□□□□ -1.13
COPS4-203ENST00000504274 R3HCC1Q9Y3T6 440 aaKnown RBP7.99□□□□□ -1.13
COPS4-203ENST00000504274 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
COPS4-203ENST00000504274 RBL2Q08999 1139 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 TCEAL1Q15170 157 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 DDR2Q16832 855 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 ZNF792Q3KQV3 632 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 NOL9Q5SY16 702 aaKnown RBP7.98□□□□□ -1.13
COPS4-203ENST00000504274 CRTC3Q6UUV7 619 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 CKAP2LQ8IYA6 745 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 FIBCD1Q8N539 461 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 ZNF655Q8N720 491 aaPredicted RBP7.98□□□□□ -1.13
COPS4-203ENST00000504274 AGBL5Q8NDL9 886 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 DSCC1Q9BVC3 393 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 FOXP3Q9BZS1 431 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 FHOD1Q9Y613 1164 aa7.98□□□□□ -1.13
COPS4-203ENST00000504274 DNAJC25-GNG10A0A024R161 153 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 H0Y8X5 98 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 SYPP08247 313 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 ITGA4P13612 1032 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 TEKQ02763 1124 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 PPP2R5DQ14738 602 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 RALGPS1Q5JS13 557 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
COPS4-203ENST00000504274 ARMC5Q96C12 935 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms