RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
CPNE4-203ENST00000503204 INPP5FQ9Y2H2 1132 aa7.16□□□□□ -1.26
CPNE4-203ENST00000503204 PCDHA11Q9Y5I1 949 aa7.16□□□□□ -1.26
CPNE4-203ENST00000503204 DNAJC25-GNG10A0A024R161 153 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 RAC2P15153 192 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 PMS1P54277 932 aaKnown RBP7.15□□□□□ -1.26
CPNE4-203ENST00000503204 EIF6P56537 245 aaKnown RBP7.15□□□□□ -1.26
CPNE4-203ENST00000503204 CCDC81Q6ZN84 652 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 TTC6Q86TZ1 520 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 ZSWIM9Q86XI8 627 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 ZNF655Q8N720 491 aaPredicted RBP7.15□□□□□ -1.26
CPNE4-203ENST00000503204 SMARCC1Q92922 1105 aaPredicted RBP7.15□□□□□ -1.26
CPNE4-203ENST00000503204 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.26
CPNE4-203ENST00000503204 PRR13Q9NZ81 148 aa7.15□□□□□ -1.26
CPNE4-203ENST00000503204 SIGLEC6O43699 453 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 ERCC5P28715 1186 aaPredicted RBP7.14□□□□□ -1.27
CPNE4-203ENST00000503204 GIPRP48546 466 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 NASPP49321 788 aaPredicted RBP7.14□□□□□ -1.27
CPNE4-203ENST00000503204 SNW1Q13573 536 aaKnown RBP7.14□□□□□ -1.27
CPNE4-203ENST00000503204 RALGPS1Q5JS13 557 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 RNF111Q6ZNA4 994 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 TMC3Q7Z5M5 1100 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 DHX38Q92620 1227 aaKnown RBP7.14□□□□□ -1.27
CPNE4-203ENST00000503204 PRDM14Q9GZV8 571 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 STRIP2Q9ULQ0 834 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 PCDHB12Q9Y5F1 795 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 SLC12A7Q9Y666 1083 aa7.14□□□□□ -1.27
CPNE4-203ENST00000503204 FAM86C2PA6NEL3 165 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 TEKQ02763 1124 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 AUHQ13825 339 aaKnown RBP7.13□□□□□ -1.27
CPNE4-203ENST00000503204 KCNMB1Q16558 191 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 BBS9Q3SYG4 887 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 UNC5AQ6ZN44 842 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 RUFY4Q6ZNE9 571 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 CCDC144CPQ8IYA2 1237 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 C19orf47Q8N9M1 422 aaKnown RBP7.13□□□□□ -1.27
CPNE4-203ENST00000503204 TCTN2Q96GX1 697 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 KIRREL1Q96J84 757 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 ADAMTS10Q9H324 1103 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 FBXL21Q9UKT6 434 aa7.13□□□□□ -1.27
CPNE4-203ENST00000503204 PRAMEF1O95521 474 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 ZGLP1P0C6A0 271 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 HK2P52789 917 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 PCBP3P57721 371 aaKnown RBP7.12□□□□□ -1.27
CPNE4-203ENST00000503204 C7orf61Q8IZ16 206 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 PDZD8Q8NEN9 1154 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 CPLX3Q8WVH0 158 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 CHMP4AQ9BY43 222 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
CPNE4-203ENST00000503204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-203ENST00000503204 SSU72P8A0A1W2PR75 194 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 C9IYK1 514 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 HPXP02790 462 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 DUSP4Q13115 394 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
CPNE4-203ENST00000503204 FYB2Q5VWT5 728 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 OXR1Q8N573 874 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 USHBP1Q8N6Y0 703 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 LINC00116Q8NCU8 138 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 SHDQ96IW2 340 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 FAM53CQ9NYF3 392 aa7.11□□□□□ -1.27
CPNE4-203ENST00000503204 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-203ENST00000503204 GLI1P08151 1106 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 GNL2Q13823 731 aaKnown RBP7.1□□□□□ -1.27
CPNE4-203ENST00000503204 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 MYLIPQ8WY64 445 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 FOXP3Q9BZS1 431 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 PHAXQ9H814 394 aaKnown RBP7.1□□□□□ -1.27
CPNE4-203ENST00000503204 CAPN10Q9HC96 672 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 GFOD1Q9NXC2 390 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 ZNF281Q9Y2X9 895 aa7.1□□□□□ -1.27
CPNE4-203ENST00000503204 FITM1A5D6W6 292 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 ATF4P18848 351 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-203ENST00000503204 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
CPNE4-203ENST00000503204 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
CPNE4-203ENST00000503204 CHRNEQ04844 493 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 TDRD10Q5VZ19 366 aaKnown RBP7.09□□□□□ -1.27
CPNE4-203ENST00000503204 PPFIBP1Q86W92 1011 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 SPPL2CQ8IUH8 684 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 LILRA2Q8N149 483 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 ANKS4BQ8N8V4 417 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
CPNE4-203ENST00000503204 LTBP3Q9NS15 1303 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 SHOXO15266 292 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 SYPP08247 313 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 RPL10P27635 214 aaKnown RBP7.08□□□□□ -1.28
CPNE4-203ENST00000503204 BMP8BP34820 402 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 NR0B2Q15466 257 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 AXDND1Q5T1B0 1012 aaPredicted RBP7.08□□□□□ -1.28
CPNE4-203ENST00000503204 OGFOD2Q6N063 350 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 DSCC1Q9BVC3 393 aa7.08□□□□□ -1.28
CPNE4-203ENST00000503204 A0A1W2PQH9 124 aa7.07□□□□□ -1.28
CPNE4-203ENST00000503204 ZNF503-AS2A6NEH8 195 aa7.07□□□□□ -1.28
CPNE4-203ENST00000503204 TP53P04637 393 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-203ENST00000503204 GSNP06396 782 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms