RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 RNF32Q9H0A6 362 aa7.55□□□□□ -1.2
RAB3GAP1-206ENST00000497080 NSUN3Q9H649 340 aaKnown RBP7.55□□□□□ -1.2
RAB3GAP1-206ENST00000497080 DDX41Q9UJV9 622 aaKnown RBP7.55□□□□□ -1.2
RAB3GAP1-206ENST00000497080 FAM86C2PA6NEL3 165 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 TNFRSF10CO14798 259 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 RPL10P27635 214 aaKnown RBP7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 ZNF655Q8N720 491 aaPredicted RBP7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 TCTN2Q96GX1 697 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 SLC6A18Q96N87 628 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 FOXP3Q9BZS1 431 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 MINPP1Q9UNW1 487 aa7.54□□□□□ -1.2
RAB3GAP1-206ENST00000497080 RECKO95980 971 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 JAG1P78504 1218 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 SPPL2CQ8IUH8 684 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 MKRN2Q9H000 416 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 ZNRF3Q9ULT6 936 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 ZNF281Q9Y2X9 895 aa7.53□□□□□ -1.2
RAB3GAP1-206ENST00000497080 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 FITM1A5D6W6 292 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 DBX1A6NMT0 343 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PRAMEF1O95521 474 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ACRP10323 421 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 DUSP4Q13115 394 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 RNF111Q6ZNA4 994 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 WAPLQ7Z5K2 1190 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 LILRA2Q8N149 483 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 LINC01599Q8WXQ3 324 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 DCP1AQ9NPI6 582 aaPredicted RBP7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ZMYM5Q9UJ78 669 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 FBXL21Q9UKT6 434 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 TCFL5Q9UL49 500 aa7.52□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SIGLEC6O43699 453 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SYPP08247 313 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 VAMP1P23763 118 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PCBP3P57721 371 aaKnown RBP7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 NR0B2Q15466 257 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 FBXO15Q8NCQ5 510 aaPredicted RBP7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 G6PC3Q9BUM1 346 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PPT2Q9UMR5 302 aa7.51□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ARID1BQ8NFD5 2236 aaPredicted RBP7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 MEIS1O00470 390 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PSPNO60542 156 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 FKTNO75072 461 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 IMPDH2P12268 514 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 RAP1GAPP47736 663 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 CHRNEQ04844 493 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 AUHQ13825 339 aaKnown RBP7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 C9orf131Q5VYM1 1079 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 ANKS4BQ8N8V4 417 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 BHLHE22Q8NFJ8 381 aaPredicted RBP7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 EPB41L4BQ9H329 900 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 CHST7Q9NS84 486 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 GPR160Q9UJ42 338 aa7.5□□□□□ -1.21
RAB3GAP1-206ENST00000497080 TMEM82A0PJX8 343 aa7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 GALK1P51570 392 aa7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PAK2Q13177 524 aa7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 RUFY4Q6ZNE9 571 aa7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 MRRFQ96E11 262 aaKnown RBP7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SUCOQ9UBS9 1254 aaKnown RBP7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PCDHB12Q9Y5F1 795 aa7.49□□□□□ -1.21
RAB3GAP1-206ENST00000497080 NOTOA8MTQ0 251 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 C9IYK1 514 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SNX17Q15036 470 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 BBS9Q3SYG4 887 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SIRT2Q8IXJ6 389 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 PPP1R16BQ96T49 567 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 GINM1Q9NU53 330 aa7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 YBX2Q9Y2T7 364 aaKnown RBP7.48□□□□□ -1.21
RAB3GAP1-206ENST00000497080 USP2O75604 605 aaPredicted RBP7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 KRT1P04264 644 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 TMEM253P0C7T8 217 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 C1QTNF9P0C862 333 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SLC14A2Q15849 920 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 CCDC144CPQ8IYA2 1237 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 KCNN1Q92952 543 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 MAP6Q96JE9 813 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 CWC22Q9HCG8 908 aaKnown RBP7.47□□□□□ -1.21
RAB3GAP1-206ENST00000497080 NFIBO00712 420 aa7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 TSPAN15O95858 294 aa7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 EFEMP2O95967 443 aa7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 TP53P04637 393 aaPredicted RBP7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 CTSKP43235 329 aa7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 PMS1P54277 932 aaKnown RBP7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 ZYXQ15942 572 aaKnown RBP7.46□□□□□ -1.22
RAB3GAP1-206ENST00000497080 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms