RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
GARNL3-219ENST00000495172 MOV10L1Q9BXT6 1211 aaKnown RBP11.2□□□□□ -0.62
GARNL3-219ENST00000495172 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
GARNL3-219ENST00000495172 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-219ENST00000495172 TMEM221A6NGB7 291 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 M0R296 226 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 RHBDL3P58872 404 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-219ENST00000495172 LINS1Q8NG48 757 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 RMDN1Q96DB5 314 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 HIPK3Q9H422 1215 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
GARNL3-219ENST00000495172 MROH5Q6ZUA9 1318 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 SPDYE16A6NNV3 312 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-219ENST00000495172 ADCY6O43306 1168 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 PDE8BO95263 885 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 PGK2P07205 417 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 ERCC3P19447 782 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 EP400NLQ6ZTU2 488 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 KAZALD1Q96I82 304 aa11.18□□□□□ -0.62
GARNL3-219ENST00000495172 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 ARVCFO00192 962 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 CD4P01730 458 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 ASGR1P07306 291 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
GARNL3-219ENST00000495172 FGFR2P21802 821 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 CLUL1Q15846 466 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 TRPV6Q9H1D0 765 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 MYO7AQ13402 2215 aa11.17□□□□□ -0.62
GARNL3-219ENST00000495172 CEP250Q9BV73 2442 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 PTGS1P23219 599 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L24Q0WX57 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 FLIIQ13045 1269 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 FKBP5Q13451 457 aaPredicted RBP11.16□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 CATSPERGQ6ZRH7 1159 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 ADSSL1Q8N142 457 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 GTF3C2Q8WUA4 911 aaPredicted RBP11.16□□□□□ -0.62
GARNL3-219ENST00000495172 EDAQ92838 391 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 TSEN34Q9BSV6 310 aaKnown RBP11.16□□□□□ -0.62
GARNL3-219ENST00000495172 NOC4LQ9BVI4 516 aaKnown RBP11.16□□□□□ -0.62
GARNL3-219ENST00000495172 SUGCTQ9HAC7 445 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 ZBTB21Q9ULJ3 1066 aa11.16□□□□□ -0.62
GARNL3-219ENST00000495172 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 VCAM1P19320 739 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 HERC4Q5GLZ8 1057 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-219ENST00000495172 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 DGLUCYQ7Z3D6 616 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 ADHFE1Q8IWW8 467 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.62
GARNL3-219ENST00000495172 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 ACER1Q8TDN7 264 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
GARNL3-219ENST00000495172 GLT1D1Q96MS3 346 aa11.15□□□□□ -0.62
GARNL3-219ENST00000495172 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-219ENST00000495172 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 KDM4AO75164 1064 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 PDGFBP01127 241 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-219ENST00000495172 ASNSP08243 561 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-219ENST00000495172 PHKA1P46020 1223 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 BEX3Q00994 111 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 PLS1Q14651 629 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 BMP8AQ7Z5Y6 402 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 FRMD5Q7Z6J6 570 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 NCAPG2Q86XI2 1143 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 DZIP1Q86YF9 867 aaKnown RBP11.14□□□□□ -0.63
GARNL3-219ENST00000495172 HERC6Q8IVU3 1022 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 FBXL6Q8N531 539 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 ABCF2Q9UG63 623 aa11.14□□□□□ -0.63
GARNL3-219ENST00000495172 MROH7-TTC4A0A0A0MT08 1334 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 ELP1O95163 1332 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 GRM8O00222 908 aa11.13□□□□□ -0.63
GARNL3-219ENST00000495172 TLR3O15455 904 aaKnown RBP11.13□□□□□ -0.63
GARNL3-219ENST00000495172 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
GARNL3-219ENST00000495172 AKR1A1P14550 325 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms