RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 CREG2Q8IUH2 290 aa9.07□□□□□ -0.96
MSL3-217ENST00000494268 C7orf61Q8IZ16 206 aa9.07□□□□□ -0.96
MSL3-217ENST00000494268 ABI1Q8IZP0 508 aa9.07□□□□□ -0.96
MSL3-217ENST00000494268 KLHL6Q8WZ60 621 aa9.07□□□□□ -0.96
MSL3-217ENST00000494268 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
MSL3-217ENST00000494268 CARS2Q9HA77 564 aaKnown RBP9.07□□□□□ -0.96
MSL3-217ENST00000494268 SLC12A7Q9Y666 1083 aa9.07□□□□□ -0.96
MSL3-217ENST00000494268 SLC7A5Q01650 507 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 PLCL1Q15111 1095 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 ASCC2Q9H1I8 757 aaPredicted RBP9.06□□□□□ -0.96
MSL3-217ENST00000494268 GFOD1Q9NXC2 390 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 ZNF451Q9Y4E5 1061 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 PCDHB12Q9Y5F1 795 aa9.06□□□□□ -0.96
MSL3-217ENST00000494268 MEIS1O00470 390 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 PRAMEF1O95521 474 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 BBS9Q3SYG4 887 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 LARP1BQ659C4 914 aaKnown RBP9.05□□□□□ -0.96
MSL3-217ENST00000494268 ANKS3Q6ZW76 656 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 TMPRSS7Q7RTY8 843 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 MICAL1Q8TDZ2 1067 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
MSL3-217ENST00000494268 HDAC8Q9BY41 377 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 ACTR10Q9NZ32 417 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 DUSP13Q9UII6 198 aa9.05□□□□□ -0.96
MSL3-217ENST00000494268 SIGLEC6O43699 453 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 VHLLQ6RSH7 139 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 ENOX1Q8TC92 643 aaKnown RBP9.04□□□□□ -0.96
MSL3-217ENST00000494268 PI4K2BQ8TCG2 481 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
MSL3-217ENST00000494268 MBNL3Q9NUK0 354 aaKnown RBP9.04□□□□□ -0.96
MSL3-217ENST00000494268 LMCD1Q9NZU5 365 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 PCDHA11Q9Y5I1 949 aa9.04□□□□□ -0.96
MSL3-217ENST00000494268 CBFA2T2O43439 604 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 CD247P20963 164 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 DAGLBQ8NCG7 672 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
MSL3-217ENST00000494268 BRF1Q92994 677 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 TCTN2Q96GX1 697 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 HAUS7Q99871 368 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 GP6Q9HCN6 339 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 CHST7Q9NS84 486 aa9.03□□□□□ -0.96
MSL3-217ENST00000494268 B2RBV5 119 aa9.02□□□□□ -0.97
MSL3-217ENST00000494268 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.97
MSL3-217ENST00000494268 GTF2F1P35269 517 aaKnown RBP eCLIP9.02□□□□□ -0.97
MSL3-217ENST00000494268 ZNF445P59923 1031 aa9.02□□□□□ -0.97
MSL3-217ENST00000494268 EGR3Q06889 387 aa9.02□□□□□ -0.97
MSL3-217ENST00000494268 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
MSL3-217ENST00000494268 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
MSL3-217ENST00000494268 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
MSL3-217ENST00000494268 SUSD2Q9UGT4 822 aa9.02□□□□□ -0.97
MSL3-217ENST00000494268 KLF4O43474 513 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 EPHX1P07099 455 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 LTKP29376 864 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 CTSKP43235 329 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 XP32Q5T750 250 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 HEATR6Q6AI08 1181 aaKnown RBP9.01□□□□□ -0.97
MSL3-217ENST00000494268 SLC23A3Q6PIS1 610 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 ZNF655Q8N720 491 aaPredicted RBP9.01□□□□□ -0.97
MSL3-217ENST00000494268 FGD4Q96M96 766 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 ST7Q9NRC1 585 aa9.01□□□□□ -0.97
MSL3-217ENST00000494268 STK10O94804 968 aaKnown RBP9□□□□□ -0.97
MSL3-217ENST00000494268 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
MSL3-217ENST00000494268 CELF2-AS1Q8N7Q2 184 aa9□□□□□ -0.97
MSL3-217ENST00000494268 KLHL25Q9H0H3 589 aa9□□□□□ -0.97
MSL3-217ENST00000494268 ADGRE2Q9UHX3 823 aa9□□□□□ -0.97
MSL3-217ENST00000494268 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
MSL3-217ENST00000494268 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 DDAH1O94760 285 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 TCEAL1Q15170 157 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 RALGPS1Q5JS13 557 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 ADCY4Q8NFM4 1077 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 FOXP3Q9BZS1 431 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 ADAMTS10Q9H324 1103 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 SLAMF8Q9P0V8 285 aa8.99□□□□□ -0.97
MSL3-217ENST00000494268 PPP1R1BQ9UD71 204 aaPredicted RBP8.99□□□□□ -0.97
MSL3-217ENST00000494268 TEKQ02763 1124 aa8.98□□□□□ -0.97
MSL3-217ENST00000494268 FXNQ16595 210 aa8.98□□□□□ -0.97
MSL3-217ENST00000494268 ADAT2Q7Z6V5 191 aaKnown RBP8.98□□□□□ -0.97
MSL3-217ENST00000494268 DSCC1Q9BVC3 393 aa8.98□□□□□ -0.97
MSL3-217ENST00000494268 NOL6Q9H6R4 1146 aaKnown RBP8.98□□□□□ -0.97
MSL3-217ENST00000494268 GJB6O95452 261 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 SYPP08247 313 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 ITGA4P13612 1032 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 PPP2R5DQ14738 602 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 NCAPHQ15003 741 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 MRM1Q6IN84 353 aaKnown RBP8.97□□□□□ -0.97
MSL3-217ENST00000494268 CRTC3Q6UUV7 619 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 CBLL1Q75N03 491 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 FIBCD1Q8N539 461 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 LRRN4CLQ8ND94 238 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 ALPK1Q96QP1 1244 aa8.97□□□□□ -0.97
MSL3-217ENST00000494268 RC3H2Q9HBD1 1191 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms