RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 TOP6BLQ8N6T0 577 aa11□□□□□ -0.65
PTPRC-212ENST00000491302 RCC1LQ96I51 464 aaKnown RBP11□□□□□ -0.65
PTPRC-212ENST00000491302 AARSD1Q9BTE6 412 aaKnown RBP11□□□□□ -0.65
PTPRC-212ENST00000491302 BRINP2Q9C0B6 783 aa11□□□□□ -0.65
PTPRC-212ENST00000491302 GP6Q9HCN6 339 aa11□□□□□ -0.65
PTPRC-212ENST00000491302 C1GALT1Q9NS00 363 aa11□□□□□ -0.65
PTPRC-212ENST00000491302 PRR13Q9NZ81 148 aa11□□□□□ -0.65
PTPRC-212ENST00000491302 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 DNAJC6O75061 913 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 NBPF9Q3BBW0 867 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 DUSP23Q9BVJ7 150 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 PLAAQ9Y263 795 aa10.99□□□□□ -0.65
PTPRC-212ENST00000491302 EOMESO95936 686 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 ITGAVP06756 1048 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 PPP2R2AP63151 447 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 ZNF227Q86WZ6 799 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 FAM83CQ9BQN1 747 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 APEX2Q9UBZ4 518 aa10.98□□□□□ -0.65
PTPRC-212ENST00000491302 SHOXO15266 292 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 SCUBE1Q8IWY4 988 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 ZNF513Q8N8E2 541 aaPredicted RBP10.97□□□□□ -0.65
PTPRC-212ENST00000491302 DHRS4Q9BTZ2 278 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 PRDM5Q9NQX1 630 aaPredicted RBP10.97□□□□□ -0.65
PTPRC-212ENST00000491302 ARHGEF4Q9NR80 690 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 IFT57Q9NWB7 429 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 AKT3Q9Y243 479 aa10.97□□□□□ -0.65
PTPRC-212ENST00000491302 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
PTPRC-212ENST00000491302 RNF225M0QZC1 329 aaPredicted RBP10.96□□□□□ -0.65
PTPRC-212ENST00000491302 KIR3DL1P43629 444 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 TKFCQ3LXA3 575 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 SFRP5Q5T4F7 317 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 ARHGEF39Q8N4T4 335 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 SYTL5Q8TDW5 730 aaPredicted RBP10.96□□□□□ -0.65
PTPRC-212ENST00000491302 GTF2IRD1Q9UHL9 959 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 EMC9Q9Y3B6 208 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 FHOD1Q9Y613 1164 aa10.96□□□□□ -0.65
PTPRC-212ENST00000491302 TRBV23-1A0A0A0MS06 115 aa10.95□□□□□ -0.66
PTPRC-212ENST00000491302 FGFR1P11362 822 aa10.95□□□□□ -0.66
PTPRC-212ENST00000491302 ASCC2Q9H1I8 757 aaPredicted RBP10.95□□□□□ -0.66
PTPRC-212ENST00000491302 hCG_2014768A0A024R1R8 64 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 FAM87AP0C7U9 286 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 ZNF445P59923 1031 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 CYP27C1Q4G0S4 372 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 KISS1RQ969F8 398 aaPredicted RBP10.94□□□□□ -0.66
PTPRC-212ENST00000491302 MRGPRX3Q96LB0 322 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 PRDM14Q9GZV8 571 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 CD2APQ9Y5K6 639 aa10.94□□□□□ -0.66
PTPRC-212ENST00000491302 RFPL3O75679 317 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 L1CAMP32004 1257 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 IGBP1P78318 339 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 OGFOD3Q6PK18 319 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 TRIM59Q8IWR1 403 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 ADCY4Q8NFM4 1077 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 EXOC2Q96KP1 924 aa10.93□□□□□ -0.66
PTPRC-212ENST00000491302 SSBP4Q9BWG4 385 aaPredicted RBP10.93□□□□□ -0.66
PTPRC-212ENST00000491302 CGGBP1Q9UFW8 167 aaPredicted RBP10.93□□□□□ -0.66
PTPRC-212ENST00000491302 NOP58Q9Y2X3 529 aaKnown RBP10.93□□□□□ -0.66
PTPRC-212ENST00000491302 SF3B6Q9Y3B4 125 aaKnown RBP10.93□□□□□ -0.66
PTPRC-212ENST00000491302 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
PTPRC-212ENST00000491302 DNAJC25-GNG10A0A024R161 153 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 PLD2O14939 933 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
PTPRC-212ENST00000491302 CYP27A1Q02318 531 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 GRB10Q13322 594 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 DALRD3Q5D0E6 543 aaKnown RBP10.92□□□□□ -0.66
PTPRC-212ENST00000491302 FOXB2Q5VYV0 432 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 NSMFQ6X4W1 530 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 C22orf34Q6ZV56 151 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
PTPRC-212ENST00000491302 IGF2BP3O00425 579 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPRC-212ENST00000491302 LEFTY1O75610 366 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 FNDC3BQ53EP0 1204 aaKnown RBP10.91□□□□□ -0.66
PTPRC-212ENST00000491302 FAM209AQ5JX71 171 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 ZAR1Q86SH2 424 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 FIBCD1Q8N539 461 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 DTWD2Q8NBA8 298 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 NINJ1Q92982 152 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 BRF1Q92994 677 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 GPATCH3Q96I76 525 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 NOL6Q9H6R4 1146 aaKnown RBP10.91□□□□□ -0.66
PTPRC-212ENST00000491302 NCOA5Q9HCD5 579 aaKnown RBP10.91□□□□□ -0.66
PTPRC-212ENST00000491302 STOML1Q9UBI4 398 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
PTPRC-212ENST00000491302 PRODHO43272 600 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 LRRN2O75325 713 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 CAPNS1P04632 268 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 PABPC1P11940 636 aaKnown RBP10.9□□□□□ -0.66
PTPRC-212ENST00000491302 MASP1P48740 699 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 ANAPC15P60006 121 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 GPAT2Q6NUI2 795 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 PIWIL2Q8TC59 973 aaKnown RBP10.9□□□□□ -0.66
PTPRC-212ENST00000491302 ENOX1Q8TC92 643 aaKnown RBP10.9□□□□□ -0.66
PTPRC-212ENST00000491302 MRPL4Q9BYD3 311 aaKnown RBP10.9□□□□□ -0.66
PTPRC-212ENST00000491302 GFOD1Q9NXC2 390 aa10.9□□□□□ -0.66
PTPRC-212ENST00000491302 SIGLEC6O43699 453 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms