RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 VPS54Q9P1Q0 977 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 MAPK8IP1Q9UQF2 711 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 NF2P35240 595 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 EIF5P55010 431 aaKnown RBP11.43□□□□□ -0.58
BRD9-209ENST00000490814 SLC4A8Q2Y0W8 1093 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 CSRNP2Q9H175 543 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 A0A0U1RQJ8 604 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 AKR1B15C9JRZ8 316 aaPredicted RBP11.43□□□□□ -0.58
BRD9-209ENST00000490814 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 TC2NQ8N9U0 490 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
BRD9-209ENST00000490814 ATRIPQ8WXE1 791 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 EPSTI1Q96J88 318 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 FAM107BQ9H098 131 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 FAM204AQ9H8W3 233 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 MRC1P22897 1456 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 GCFC2P16383 781 aaKnown RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 MTA1Q13330 715 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 MLKLQ8NB16 471 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 TTLL11Q8NHH1 800 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 IGDCC4Q8TDY8 1250 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRD9-209ENST00000490814 KAT2BQ92831 832 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 TATDN2Q93075 761 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 PDGFDQ9GZP0 370 aaPredicted RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 CTAGE15A4D2H0 777 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 PCCAP05165 728 aaPredicted RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 CTAGE8P0CG41 777 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 ITPK1Q13572 414 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 CASP8Q14790 479 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 ZNF174Q15697 407 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 CTAGE6Q86UF2 777 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 CTAGE4Q8IX94 777 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 STRBPQ96SI9 672 aaKnown RBP11.42□□□□□ -0.58
BRD9-209ENST00000490814 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
BRD9-209ENST00000490814 CTAGE9A4FU28 777 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 POTEB2H3BUK9 544 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 VSNL1P62760 191 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 AKNAD1Q5T1N1 836 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 TMEM139Q8IV31 216 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 KIFC2Q96AC6 838 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 ISCA1Q9BUE6 129 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 BLZF1Q9H2G9 400 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 LRRC4BQ9NT99 713 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 ATRNO75882 1429 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 MAP2K7O14733 419 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 PDE8BO95263 885 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 MMP1P03956 469 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 RFC4P35249 363 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 LIG3P49916 1009 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 RBL2Q08999 1139 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SMARCC1Q92922 1105 aaPredicted RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 VPS16Q9H269 839 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 TRIM75PA6NK02 468 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 N4BP3O15049 544 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 MAFGO15525 162 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 TOB1P50616 345 aaPredicted RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 CTSWP56202 376 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SLC35F6Q8N357 371 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SDR42E1Q8WUS8 393 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 THOC1Q96FV9 657 aaKnown RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 CDC5LQ99459 802 aaKnown RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 SPATS2LQ9NUQ6 558 aaKnown RBP11.41□□□□□ -0.58
BRD9-209ENST00000490814 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
BRD9-209ENST00000490814 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
BRD9-209ENST00000490814 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
BRD9-209ENST00000490814 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
BRD9-209ENST00000490814 UBE3CQ15386 1083 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 NTRK3Q16288 839 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 KRT23Q9C075 422 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
BRD9-209ENST00000490814 CEP131Q9UPN4 1083 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 C5P01031 1676 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 COQ9O75208 318 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 XBP1P17861 261 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 FBXW10Q5XX13 1052 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 LRRC31Q6UY01 552 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 LCORLQ8N3X6 602 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 FBXL16Q8N461 479 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
BRD9-209ENST00000490814 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms