RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-213ENST00000489295 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 USP14P54578 494 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 PPATQ06203 517 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 TROAPQ12815 778 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 FEZ1Q99689 392 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
LRRFIP1-213ENST00000489295 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 SYCE3A1L190 88 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 F13A1P00488 732 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 PDCP20941 246 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 KIF5BP33176 963 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 UBE2HP62256 183 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 FMR1Q06787 632 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 PPIL2Q13356 520 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 GRM4Q14833 912 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 FOXD4L5Q5VV16 416 aaPredicted RBP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 ZNF280CQ8ND82 737 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 FOXD4L4Q8WXT5 416 aaPredicted RBP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 LPAR1Q92633 364 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
LRRFIP1-213ENST00000489295 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 C19orf81C9J6K1 198 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 LARGE1O95461 756 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 SYT1P21579 422 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 GNAQP50148 359 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 BACE1P56817 501 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 ME3Q16798 604 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 RTN1Q16799 776 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 CST9Q5W186 159 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 C12orf42Q96LP6 360 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 NAP1L2Q9ULW6 460 aaPredicted RBP12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 LOC285556D6RIA3 1793 aa12.61□□□□□ -0.39
LRRFIP1-213ENST00000489295 CXCL11O14625 94 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 CDKL5O76039 1030 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 NDUFB10O96000 172 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 PDHBP11177 359 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 ECE1P42892 770 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 NUP133Q8WUM0 1156 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 NAP1L5Q96NT1 182 aaPredicted RBP12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 TCHHQ07283 1943 aa12.6□□□□□ -0.39
LRRFIP1-213ENST00000489295 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 F5H6K3 240 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 ZBTB48P10074 688 aaPredicted RBP12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 SLC1A4P43007 532 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 HUNKP57058 714 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 KLRC3Q07444 240 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 SCRN1Q12765 414 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 SPP2Q13103 211 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 MTMR2Q13614 643 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 SLC10A4Q96EP9 437 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
LRRFIP1-213ENST00000489295 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms