RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 SLC23A3Q6PIS1 610 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 UNC5AQ6ZN44 842 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 TTC6Q86TZ1 520 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 SHDQ96IW2 340 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 GMLQ99445 158 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 GBP3Q9H0R5 595 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 PAK6Q9NQU5 681 aaPredicted RBP6.82□□□□□ -1.32
ITGB1-214ENST00000488427 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 C8AP07357 584 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 TPP2P29144 1249 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-214ENST00000488427 ZP2Q05996 745 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 NCAPHQ15003 741 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 NBPF9Q3BBW0 867 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-214ENST00000488427 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-214ENST00000488427 POU5F2Q8N7G0 328 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 SYTL5Q8TDW5 730 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-214ENST00000488427 Q96M66 194 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 SEMA3GQ9NS98 782 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 DUSP13Q9UII6 198 aa6.81□□□□□ -1.32
ITGB1-214ENST00000488427 CD8BP10966 210 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 SLC7A5Q01650 507 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 BNIP3Q12983 259 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 AUHQ13825 339 aaKnown RBP6.8□□□□□ -1.32
ITGB1-214ENST00000488427 GNPTABQ3T906 1256 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 DHX38Q92620 1227 aaKnown RBP6.8□□□□□ -1.32
ITGB1-214ENST00000488427 ATP13A1Q9HD20 1204 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 ACTR10Q9NZ32 417 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 PRKAG3Q9UGI9 489 aa6.8□□□□□ -1.32
ITGB1-214ENST00000488427 ZNF214Q9UL59 606 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-214ENST00000488427 SIGLEC6O43699 453 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 FGRP09769 529 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 ACRP10323 421 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 SRFP11831 508 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 ITGA4P13612 1032 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 ITGB5P18084 799 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 PCBP3P57721 371 aaKnown RBP6.79□□□□□ -1.32
ITGB1-214ENST00000488427 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
ITGB1-214ENST00000488427 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
ITGB1-214ENST00000488427 RNF111Q6ZNA4 994 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 NFXL1Q6ZNB6 911 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 CREG2Q8IUH2 290 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 TMEM192Q8IY95 271 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 C7orf61Q8IZ16 206 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 DUSP15Q9H1R2 295 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-214ENST00000488427 U3KQE9 123 aa6.79□□□□□ -1.32
ITGB1-214ENST00000488427 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 A0A1W2PQH9 124 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 FAM86C2PA6NEL3 165 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 STK10O94804 968 aaKnown RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 RAC2P15153 192 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 ZNF143P52747 638 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 DUSP4Q13115 394 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 FXNQ16595 210 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 SPRED2Q7Z698 418 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 CKAP2LQ8IYA6 745 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 CRACR2BQ8N4Y2 399 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 ARMC5Q96C12 935 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 TANGO6Q9C0B7 1094 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 CARS2Q9HA77 564 aaKnown RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 CHST7Q9NS84 486 aa6.78□□□□□ -1.32
ITGB1-214ENST00000488427 PPP1R1BQ9UD71 204 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 SF3B6Q9Y3B4 125 aaKnown RBP6.78□□□□□ -1.32
ITGB1-214ENST00000488427 A0A087WZG4 1122 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 PPM1BO75688 479 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 GSNP06396 782 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 EGR3Q06889 387 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 GAB4Q2WGN9 574 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 ZNF574Q6ZN55 896 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-214ENST00000488427 RUFY4Q6ZNE9 571 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-214ENST00000488427 ALPK1Q96QP1 1244 aa6.77□□□□□ -1.33
ITGB1-214ENST00000488427 U2SURPO15042 1029 aaKnown RBP6.76□□□□□ -1.33
ITGB1-214ENST00000488427 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
ITGB1-214ENST00000488427 LRRN2O75325 713 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 ZNF792Q3KQV3 632 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 SOGA3Q5TF21 947 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 HIRIP3Q9BW71 556 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-214ENST00000488427 PRDM14Q9GZV8 571 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 RC3H2Q9HBD1 1191 aaKnown RBP6.76□□□□□ -1.33
ITGB1-214ENST00000488427 WHRNQ9P202 907 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
ITGB1-214ENST00000488427 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-214ENST00000488427 NOP2P46087 812 aaKnown RBP6.75□□□□□ -1.33
ITGB1-214ENST00000488427 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 TDRD10Q5VZ19 366 aaKnown RBP6.75□□□□□ -1.33
ITGB1-214ENST00000488427 POMZP3Q6PJE2 187 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 OXR1Q8N573 874 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 HAUS7Q99871 368 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms