RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 FAM209AQ5JX71 171 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 ZNF227Q86WZ6 799 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 FAM20CQ8IXL6 584 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 CRACR2BQ8N4Y2 399 aaPredicted RBP6.69□□□□□ -1.34
SRRM1-215ENST00000488317 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 MYRFLQ96LU7 910 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 DHRS4Q9BTZ2 278 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 GP6Q9HCN6 339 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 ARHGEF4Q9NR80 690 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
SRRM1-215ENST00000488317 PRODHO43272 600 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 LRRN2O75325 713 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 MASP1P48740 699 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 PPP2R5DQ14738 602 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 NBPF9Q3BBW0 867 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 YOD1Q5VVQ6 348 aaPredicted RBP6.68□□□□□ -1.34
SRRM1-215ENST00000488317 POMZP3Q6PJE2 187 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 SCUBE1Q8IWY4 988 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 DHX37Q8IY37 1157 aaKnown RBP6.68□□□□□ -1.34
SRRM1-215ENST00000488317 BRF1Q92994 677 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 MEGF10Q96KG7 1140 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 EXOC2Q96KP1 924 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 FBXL18Q96ME1 805 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 PSMG3-AS1Q96PY0 264 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 PLAAQ9Y263 795 aa6.68□□□□□ -1.34
SRRM1-215ENST00000488317 SHOXO15266 292 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
SRRM1-215ENST00000488317 CBX7O95931 251 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 CBX2Q14781 532 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-215ENST00000488317 DALRD3Q5D0E6 543 aaKnown RBP6.67□□□□□ -1.34
SRRM1-215ENST00000488317 NSMFQ6X4W1 530 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 BEND4Q6ZU67 534 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 TXNRD3Q86VQ6 643 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 ARMC10Q8N2F6 343 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 VWCEQ96DN2 955 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 BRINP2Q9C0B6 783 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 PRDM14Q9GZV8 571 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 NOL6Q9H6R4 1146 aaKnown RBP6.67□□□□□ -1.34
SRRM1-215ENST00000488317 PCDH12Q9NPG4 1184 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 C1GALT1Q9NS00 363 aa6.67□□□□□ -1.34
SRRM1-215ENST00000488317 MRPS23Q9Y3D9 190 aaKnown RBP6.67□□□□□ -1.34
SRRM1-215ENST00000488317 A0A087WZG4 1122 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 LEFTY1O75610 366 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 KCNH1O95259 989 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 RAPGEF3O95398 923 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 ZNF445P59923 1031 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 SFRP5Q5T4F7 317 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 SEZ6L2Q6UXD5 910 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 NIM1KQ8IY84 436 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 DZIP1LQ8IYY4 767 aaKnown RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 NINJ1Q92982 152 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 RCC1LQ96I51 464 aaKnown RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 DUSP23Q9BVJ7 150 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 ASCC2Q9H1I8 757 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 PRDM5Q9NQX1 630 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 GFOD1Q9NXC2 390 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 DIS3Q9Y2L1 958 aaKnown RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 EMC9Q9Y3B6 208 aa6.66□□□□□ -1.34
SRRM1-215ENST00000488317 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-215ENST00000488317 MEIS1O00470 390 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 IRS4O14654 1257 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 TBX1O43435 398 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 EOMESO95936 686 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 FGFR1P11362 822 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 PABPC1P11940 636 aaKnown RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 CNGA1P29973 690 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 GRIA2P42262 883 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 SUMO1P63165 101 aaKnown RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 PABPC4Q13310 644 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 CLEC10AQ8IUN9 316 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 ARHGEF39Q8N4T4 335 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 FIBCD1Q8N539 461 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 BTN2A2Q8WVV5 523 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 MFSD3Q96ES6 412 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 MRGPRX3Q96LB0 322 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 IER2Q9BTL4 223 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 NCOA5Q9HCD5 579 aaKnown RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 CGGBP1Q9UFW8 167 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-215ENST00000488317 FHOD1Q9Y613 1164 aa6.65□□□□□ -1.34
SRRM1-215ENST00000488317 PLD2O14939 933 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 MYCLP1P12525 358 aaPredicted RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 KCNJ6P48051 423 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 INSM1Q01101 510 aaPredicted RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 SNW1Q13573 536 aaKnown RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 ALYREFQ86V81 257 aaKnown RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 TRIM59Q8IWR1 403 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 SYTL5Q8TDW5 730 aaPredicted RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 TBC1D32Q96NH3 1257 aa6.64□□□□□ -1.35
SRRM1-215ENST00000488317 SF3B6Q9Y3B4 125 aaKnown RBP6.64□□□□□ -1.35
SRRM1-215ENST00000488317 VAMP4O75379 141 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms