RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CSGALNACT2Q8N6G5 542 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 MMS19Q96T76 1030 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 GOLGA6AQ9NYA3 693 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 PSMA7O14818 248 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 WHAMMP3Q1A5X7 153 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 RNF187Q5TA31 235 aaPredicted RBP14.27□□□□□ -0.12
VPS52-218ENST00000482399 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 NLRP10Q86W26 655 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 FAM76AQ8TAV0 307 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 SMARCAL1Q9NZC9 954 aa14.27□□□□□ -0.12
VPS52-218ENST00000482399 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.13
VPS52-218ENST00000482399 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.13
VPS52-218ENST00000482399 GOLGA6BA6NDN3 693 aa14.27□□□□□ -0.13
VPS52-218ENST00000482399 EIF3CLB5ME19 914 aaKnown RBP14.27□□□□□ -0.13
VPS52-218ENST00000482399 WNT7AO00755 349 aa14.27□□□□□ -0.13
VPS52-218ENST00000482399 CYLC1P35663 651 aaPredicted RBP14.27□□□□□ -0.13
VPS52-218ENST00000482399 EIF3CQ99613 913 aaKnown RBP14.27□□□□□ -0.13
VPS52-218ENST00000482399 FAM53CQ9NYF3 392 aa14.27□□□□□ -0.13
VPS52-218ENST00000482399 ATP2C2O75185 946 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
VPS52-218ENST00000482399 DPYDQ12882 1025 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 KRT26Q7Z3Y9 468 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 L1RE1Q9UN81 338 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 DUSP10Q9Y6W6 482 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 RPN1P04843 607 aaKnown RBP14.26□□□□□ -0.13
VPS52-218ENST00000482399 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
VPS52-218ENST00000482399 KCTD19Q17RG1 926 aaPredicted RBP14.26□□□□□ -0.13
VPS52-218ENST00000482399 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 FAM71BQ8TC56 605 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS52-218ENST00000482399 SHTN1A0MZ66 631 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 PRCPP42785 496 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
VPS52-218ENST00000482399 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS52-218ENST00000482399 MEGF6O75095 1541 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 GGCXP38435 758 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 BCAS4Q8TDM0 211 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 NOC4LQ9BVI4 516 aaKnown RBP14.25□□□□□ -0.13
VPS52-218ENST00000482399 EBAG9O00559 213 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 PDE8AO60658 829 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 KLK7P49862 253 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS52-218ENST00000482399 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS52-218ENST00000482399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.132e-8■■■■□ 19.8
VPS52-218ENST00000482399 SLIT1O75093 1534 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 KRT83P78385 493 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 PDE4DQ08499 809 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS52-218ENST00000482399 LETM2Q2VYF4 491 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
VPS52-218ENST00000482399 RASGRP2Q7LDG7 609 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 HPS3Q969F9 1004 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
VPS52-218ENST00000482399 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
VPS52-218ENST00000482399 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 BUB1O43683 1085 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 USP5P45974 858 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 INF2Q27J81 1249 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 FERMT2Q96AC1 680 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 AGPAT5Q9NUQ2 364 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 USO1O60763 962 aaKnown RBP14.24□□□□□ -0.13
VPS52-218ENST00000482399 EXOC1Q9NV70 894 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 RMND1Q9NWS8 449 aa14.24□□□□□ -0.13
VPS52-218ENST00000482399 PPP1R3GB7ZBB8 358 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 CKAP4Q07065 602 aaKnown RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 DYMQ7RTS9 669 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 EHD4Q9H223 541 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 EHD2Q9NZN4 543 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS52-218ENST00000482399 WTIPA6NIX2 430 aaPredicted RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 VEGFAP15692 232 aaPredicted RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 GUCY2FP51841 1108 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 GNGT1P63211 74 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 MAATS1Q7Z4T9 603 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 KAT14Q9H8E8 782 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 NLRC4Q9NPP4 1024 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 TFCP2L1Q9NZI6 479 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 SETD1AO15047 1707 aaKnown RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 HPDP32754 393 aaPredicted RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 ODF2Q5BJF6 829 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 SECISBP2LQ93073 1101 aaKnown RBP14.23□□□□□ -0.13
VPS52-218ENST00000482399 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 LRWD1Q9UFC0 647 aa14.23□□□□□ -0.13
VPS52-218ENST00000482399 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
VPS52-218ENST00000482399 CAVIN4Q5BKX8 364 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 IQCEQ6IPM2 695 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms