RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 MFSD4AQ8N468 514 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 ZNF669Q96BR6 464 aaPredicted RBP8.62□□□□□ -1.03
SF3B1-210ENST00000482158 LGR4Q9BXB1 951 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 KANSL2Q9H9L4 492 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 MKNK2Q9HBH9 465 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 PCDHB12Q9Y5F1 795 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 ST14Q9Y5Y6 855 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 TLDC2A0PJX2 215 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 SRFP11831 508 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
SF3B1-210ENST00000482158 SPACA3Q8IXA5 215 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 JMYQ8N9B5 988 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 PIWIL2Q8TC59 973 aaKnown RBP8.61□□□□□ -1.03
SF3B1-210ENST00000482158 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
SF3B1-210ENST00000482158 APBA2Q99767 749 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 DUSP15Q9H1R2 295 aaPredicted RBP8.61□□□□□ -1.03
SF3B1-210ENST00000482158 EPN3Q9H201 632 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 LRRC4CQ9HCJ2 640 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 GFOD1Q9NXC2 390 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 FBXL21Q9UKT6 434 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
SF3B1-210ENST00000482158 GNAT3A8MTJ3 354 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 SMARCA5O60264 1052 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-210ENST00000482158 CAPNS1P04632 268 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 ITGB7P26010 798 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 IFRD2Q12894 506 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-210ENST00000482158 TCEAL1Q15170 157 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 GPR62Q9BZJ7 368 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 PIM2Q9P1W9 311 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 WHRNQ9P202 907 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 KCNH3Q9ULD8 1083 aa8.6□□□□□ -1.03
SF3B1-210ENST00000482158 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
SF3B1-210ENST00000482158 SIGLEC6O43699 453 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 ADCY3O60266 1144 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 PRAMEF1O95521 474 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 CEACAM5P06731 702 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 ITIH2P19823 946 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 HOXA10P31260 410 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-210ENST00000482158 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-210ENST00000482158 SV2CQ496J9 727 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 PLD6Q8N2A8 252 aaKnown RBP8.59□□□□□ -1.03
SF3B1-210ENST00000482158 BRF1Q92994 677 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 ZC3H7BQ9UGR2 993 aaKnown RBP8.59□□□□□ -1.03
SF3B1-210ENST00000482158 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 FHOD1Q9Y613 1164 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
SF3B1-210ENST00000482158 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 A0A087WZG4 1122 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 A0A1W2PQU0 124 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 CYP26A1O43174 497 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 ITGAVP06756 1048 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 ITGA4P13612 1032 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 FOSL1P15407 271 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 ADAT2Q7Z6V5 191 aaKnown RBP8.58□□□□□ -1.04
SF3B1-210ENST00000482158 ARHGEF39Q8N4T4 335 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 ADCY4Q8NFM4 1077 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 SYTL5Q8TDW5 730 aaPredicted RBP8.58□□□□□ -1.04
SF3B1-210ENST00000482158 RCC1LQ96I51 464 aaKnown RBP8.58□□□□□ -1.04
SF3B1-210ENST00000482158 MRGPRX3Q96LB0 322 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 GBP3Q9H0R5 595 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 SEMA6BQ9H3T3 888 aa8.58□□□□□ -1.04
SF3B1-210ENST00000482158 TBX1O43435 398 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 PPM1BO75688 479 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 TGFB1P01137 390 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 NAT2P11245 290 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 CTSKP43235 329 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
SF3B1-210ENST00000482158 CDKAL1Q5VV42 579 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 ZNF227Q86WZ6 799 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 HSPA12BQ96MM6 686 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 SPATA9Q9BWV2 254 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 SEMA3GQ9NS98 782 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
SF3B1-210ENST00000482158 FAM155AB1AL88 458 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-210ENST00000482158 FAM153BP0C7A2 387 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 SQSTM1Q13501 440 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 FIBCD1Q8N539 461 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 LRRN4CLQ8ND94 238 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 BVESQ8NE79 360 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 NETO1Q8TDF5 533 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 NOL6Q9H6R4 1146 aaKnown RBP8.56□□□□□ -1.04
SF3B1-210ENST00000482158 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
SF3B1-210ENST00000482158 CGGBP1Q9UFW8 167 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-210ENST00000482158 C2orf27AQ580R0 203 aa8.55□□□□□ -1.04
SF3B1-210ENST00000482158 NOL9Q5SY16 702 aaKnown RBP8.55□□□□□ -1.04
SF3B1-210ENST00000482158 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
SF3B1-210ENST00000482158 ENOX1Q8TC92 643 aaKnown RBP8.55□□□□□ -1.04
SF3B1-210ENST00000482158 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
SF3B1-210ENST00000482158 AKT3Q9Y243 479 aa8.55□□□□□ -1.04
SF3B1-210ENST00000482158 DIS3Q9Y2L1 958 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms