RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TMEM179Q6ZVK1 233 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 ERC1Q8IUD2 1116 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 LCORLQ8N3X6 602 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 SHCBP1Q8NEM2 672 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 PPM1EQ8WY54 764 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 TRIM43Q96BQ3 446 aaPredicted RBP8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 LENG1Q96BZ8 264 aaPredicted RBP8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 RIOK1Q9BRS2 568 aaKnown RBP8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 TTYH1Q9H313 450 aaPredicted RBP8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 ARMT1Q9H993 441 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 TACC3Q9Y6A5 838 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 A0A1W2PQ45 241 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 A0A1W2PQY0 241 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 WDR46O15213 610 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 AKR1B1P15121 316 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 VTI1AQ96AJ9 217 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 TMEM39AQ9NV64 488 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 ZHX1Q9UKY1 873 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 CNPY2Q9Y2B0 182 aa8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 LAMA2P24043 3122 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-206ENST00000477485 MYO9BQ13459 2157 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 CYP2D7A0A087X1C5 515 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 MBD4O95243 580 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 SLC25A27O95847 323 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 IFIT2P09913 472 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 AKR1A1P14550 325 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 TAL1P17542 331 aaPredicted RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 DNAJB2P25686 324 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 ITGB8P26012 769 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 GABPAQ06546 454 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 TMEM132BQ14DG7 1078 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 SNX17Q15036 470 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 CEP85Q6P2H3 762 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 CLASRPQ8N2M8 674 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 VCPKMTQ9H867 229 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 DCP1AQ9NPI6 582 aaPredicted RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 STARD7Q9NQZ5 370 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 FBXO28Q9NVF7 368 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 ISY1Q9ULR0 285 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
RTFDC1-206ENST00000477485 SYNRGQ9UMZ2 1314 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 EYSQ5T1H1 3165 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 PRKAB2O43741 272 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 EEF2P13639 858 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 STAT3P40763 770 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 CDK8P49336 464 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 EPHB4P54760 987 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 SLFNL1Q499Z3 407 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 HSP90AB4PQ58FF6 505 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 FAM83BQ5T0W9 1011 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 SNRNP48Q6IEG0 339 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 TMED8Q6PL24 325 aaPredicted RBP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 ABRAQ8N0Z2 381 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 RHPN1Q8TCX5 695 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 NUP133Q8WUM0 1156 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 DDX11Q96FC9 970 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 PAG1Q9NWQ8 432 aa8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 TCF20Q9UGU0 1960 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-206ENST00000477485 GREB1LQ9C091 1923 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 VWA5AO00534 786 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 KIAA0355O15063 1070 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 RLBP1P12271 317 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 ACLYP53396 1101 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 RIOX2Q8IUF8 465 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 CPXCR1Q8N123 301 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 IL27Q8NEV9 243 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 TIFAQ96CG3 184 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 CCDC17Q96LX7 622 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 NUP88Q99567 741 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 RNF39Q9H2S5 420 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 ZNF576Q9H609 170 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 SPC25Q9HBM1 224 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 ATP8A2Q9NTI2 1148 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 FAM184BQ9ULE4 1060 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 SLC4A4Q9Y6R1 1079 aa8.03□□□□□ -1.12
RTFDC1-206ENST00000477485 TMEM265A0A087WTH1 108 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 TCRBV5S4A2TA0A5A2 114 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms