RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 KIR3DL1P43629 444 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 YARSP54577 528 aaKnown RBP5.75□□□□□ -1.49
RPL39-203ENST00000477403 TNK2Q07912 1038 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 MPP2Q14168 576 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 MRPL58Q14197 206 aaKnown RBP5.75□□□□□ -1.49
RPL39-203ENST00000477403 ERMP1Q7Z2K6 904 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 THEMISQ8N1K5 641 aaPredicted RBP5.75□□□□□ -1.49
RPL39-203ENST00000477403 COX4I2Q96KJ9 171 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 CARS2Q9HA77 564 aaKnown RBP5.75□□□□□ -1.49
RPL39-203ENST00000477403 ZSWIM5Q9P217 1185 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 REV1Q9UBZ9 1251 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 KLHL3Q9UH77 587 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 ST14Q9Y5Y6 855 aa5.75□□□□□ -1.49
RPL39-203ENST00000477403 SPAG9O60271 1321 aaKnown RBP5.74□□□□□ -1.49
RPL39-203ENST00000477403 ARHGAP5Q13017 1502 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 GARTP22102 1010 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 FBXL19Q6PCT2 694 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 HS2ST1Q7LGA3 356 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 ATG4DQ86TL0 474 aaPredicted RBP5.74□□□□□ -1.49
RPL39-203ENST00000477403 DNAJB8Q8NHS0 232 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 CYB5D2Q8WUJ1 264 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 UBE2FQ969M7 185 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 GGT7Q9UJ14 662 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 CEP131Q9UPN4 1083 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 POLR3KQ9Y2Y1 108 aaPredicted RBP5.74□□□□□ -1.49
RPL39-203ENST00000477403 DIP2CQ9Y2E4 1556 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 CPS1P31327 1500 aa5.74□□□□□ -1.49
RPL39-203ENST00000477403 CDK13Q14004 1512 aaKnown RBP5.74□□□□□ -1.49
RPL39-203ENST00000477403 MED1Q15648 1581 aaPredicted RBP5.73□□□□□ -1.49
RPL39-203ENST00000477403 SHANK2Q9UPX8 1470 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 CHURC1-FNTBB4DL54 471 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 HTR3BO95264 441 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 ZNF16P17020 682 aaPredicted RBP5.73□□□□□ -1.49
RPL39-203ENST00000477403 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
RPL39-203ENST00000477403 TNNI2P48788 182 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 MFAP1P55081 439 aaKnown RBP5.73□□□□□ -1.49
RPL39-203ENST00000477403 GGT6Q6P531 493 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 FAM196AQ6ZSG2 479 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 REC114Q7Z4M0 266 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 TMEM87AQ8NBN3 555 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 SUPT16HQ9Y5B9 1047 aaKnown RBP5.73□□□□□ -1.49
RPL39-203ENST00000477403 PRR36Q9H6K5 1346 aa5.73□□□□□ -1.49
RPL39-203ENST00000477403 C3P01024 1663 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 CWF19L2Q2TBE0 894 aaKnown RBP5.72□□□□□ -1.49
RPL39-203ENST00000477403 THAP5Q7Z6K1 395 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 SLFN12Q8IYM2 578 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 PHACTR4Q8IZ21 702 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 RGS22Q8NE09 1264 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 PPP1R13LQ8WUF5 828 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 FAM168AQ92567 244 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 Q96M66 194 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 GOLGA2P5Q9HBQ8 144 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 LMCD1Q9NZU5 365 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 KIAA1107Q9UPP5 1409 aa5.72□□□□□ -1.49
RPL39-203ENST00000477403 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.49
RPL39-203ENST00000477403 DNAJA2O60884 412 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 IGSF3O75054 1194 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 HNRNPMP52272 730 aaKnown RBP eCLIP5.71□□□□□ -1.5
RPL39-203ENST00000477403 OGFOD2Q6N063 350 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 BAHD1Q8TBE0 780 aaPredicted RBP5.71□□□□□ -1.5
RPL39-203ENST00000477403 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.5
RPL39-203ENST00000477403 ZNF296Q8WUU4 475 aaPredicted RBP5.71□□□□□ -1.5
RPL39-203ENST00000477403 CCDC74BQ96LY2 380 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 BRMS1Q9HCU9 246 aa5.71□□□□□ -1.5
RPL39-203ENST00000477403 RGS17Q9UGC6 210 aaPredicted RBP5.71□□□□□ -1.5
RPL39-203ENST00000477403 KIF14Q15058 1648 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 ROBO2Q9HCK4 1378 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 WASH4PA8MWX3 477 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 CHMP4BP1P59074 171 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 FLAD1Q8NFF5 587 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 KIF2CQ99661 725 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 KCNQ5Q9NR82 932 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 CFDP1Q9UEE9 299 aaPredicted RBP5.7□□□□□ -1.5
RPL39-203ENST00000477403 ADAMTS1Q9UHI8 967 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 CTNND2Q9UQB3 1225 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 A2MP01023 1474 aa5.7□□□□□ -1.5
RPL39-203ENST00000477403 TNRQ92752 1358 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 MYO5CQ9NQX4 1742 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 CEP170BQ9Y4F5 1589 aaPredicted RBP5.69□□□□□ -1.5
RPL39-203ENST00000477403 GREM1O60565 184 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 LRRN2O75325 713 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 TPP2P29144 1249 aaPredicted RBP5.69□□□□□ -1.5
RPL39-203ENST00000477403 GBP1P32455 592 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 CRKP46108 304 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 SEZ6Q53EL9 994 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 CREG2Q8IUH2 290 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 RNF141Q8WVD5 230 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 LRRC3Q9BY71 257 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 TRIT1Q9H3H1 467 aaKnown RBP5.69□□□□□ -1.5
RPL39-203ENST00000477403 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 SLAMF8Q9P0V8 285 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
RPL39-203ENST00000477403 ABCA6Q8N139 1617 aa5.69□□□□□ -1.5
RPL39-203ENST00000477403 PLEKHH2Q8IVE3 1493 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms