RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 C9orf131Q5VYM1 1079 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 OXR1Q8N573 874 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 PDZD8Q8NEN9 1154 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
LTN1-204ENST00000475344 TCTN2Q96GX1 697 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 PRDM14Q9GZV8 571 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 NSUN3Q9H649 340 aaKnown RBP7.82□□□□□ -1.16
LTN1-204ENST00000475344 ZMYM5Q9UJ78 669 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 ZNRF3Q9ULT6 936 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 PPT2Q9UMR5 302 aa7.82□□□□□ -1.16
LTN1-204ENST00000475344 TNFRSF10CO14798 259 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 PRAMEF1O95521 474 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
LTN1-204ENST00000475344 TEKQ02763 1124 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 DUSP4Q13115 394 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 ENOX1Q8TC92 643 aaKnown RBP7.81□□□□□ -1.16
LTN1-204ENST00000475344 RNF32Q9H0A6 362 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 TCFL5Q9UL49 500 aa7.81□□□□□ -1.16
LTN1-204ENST00000475344 FITM1A5D6W6 292 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 SYPP08247 313 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 PAK2Q13177 524 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 TDRD10Q5VZ19 366 aaKnown RBP7.8□□□□□ -1.16
LTN1-204ENST00000475344 CCDC81Q6ZN84 652 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 DAGLBQ8NCG7 672 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 KCNK12Q9HB15 430 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 FAM86C1Q9NVL1 165 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 GFOD1Q9NXC2 390 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 PCDHB12Q9Y5F1 795 aa7.8□□□□□ -1.16
LTN1-204ENST00000475344 ACRP10323 421 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 IMPDH2P12268 514 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 VAMP1P23763 118 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 MESP2Q0VG99 397 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 TIGD5Q53EQ6 642 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 SYDE1Q6ZW31 735 aaPredicted RBP7.79□□□□□ -1.16
LTN1-204ENST00000475344 CCDC144CPQ8IYA2 1237 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
LTN1-204ENST00000475344 EBF1Q9UH73 591 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 GPR160Q9UJ42 338 aa7.79□□□□□ -1.16
LTN1-204ENST00000475344 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 GALK1P51570 392 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 SPPL2CQ8IUH8 684 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 LILRA2Q8N149 483 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 EPB41L4BQ9H329 900 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 DCP1AQ9NPI6 582 aaPredicted RBP7.78□□□□□ -1.16
LTN1-204ENST00000475344 CHST7Q9NS84 486 aa7.78□□□□□ -1.16
LTN1-204ENST00000475344 C9IYK1 514 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 USP2O75604 605 aaPredicted RBP7.77□□□□□ -1.17
LTN1-204ENST00000475344 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
LTN1-204ENST00000475344 CHRNEQ04844 493 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 ZPBP2Q6X784 338 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 METTL16Q86W50 562 aaKnown RBP7.77□□□□□ -1.17
LTN1-204ENST00000475344 NT5DC4Q86YG4 428 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 SIRT2Q8IXJ6 389 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 ANKS4BQ8N8V4 417 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 DHRS1Q96LJ7 313 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 DSCC1Q9BVC3 393 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 SP110Q9HB58 689 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 GINM1Q9NU53 330 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 SUCOQ9UBS9 1254 aaKnown RBP7.77□□□□□ -1.17
LTN1-204ENST00000475344 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
LTN1-204ENST00000475344 UNCXA6NJT0 531 aa7.76□□□□□ -1.17
LTN1-204ENST00000475344 PSPNO60542 156 aa7.76□□□□□ -1.17
LTN1-204ENST00000475344 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
LTN1-204ENST00000475344 AUHQ13825 339 aaKnown RBP7.76□□□□□ -1.17
LTN1-204ENST00000475344 ZYXQ15942 572 aaKnown RBP7.76□□□□□ -1.17
LTN1-204ENST00000475344 FBXO15Q8NCQ5 510 aaPredicted RBP7.76□□□□□ -1.17
LTN1-204ENST00000475344 CRBNQ96SW2 442 aa7.76□□□□□ -1.17
LTN1-204ENST00000475344 TM9SF2Q99805 663 aa7.76□□□□□ -1.17
LTN1-204ENST00000475344 KIAA1522Q9P206 1035 aaPredicted RBP7.76□□□□□ -1.17
LTN1-204ENST00000475344 PDE6BP35913 854 aa7.75□□□□□ -1.17
LTN1-204ENST00000475344 SLC14A2Q15849 920 aa7.75□□□□□ -1.17
LTN1-204ENST00000475344 BBS9Q3SYG4 887 aa7.75□□□□□ -1.17
LTN1-204ENST00000475344 DCAF15Q66K64 600 aa7.75□□□□□ -1.17
LTN1-204ENST00000475344 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
LTN1-204ENST00000475344 LSRQ86X29 649 aaPredicted RBP7.75□□□□□ -1.17
LTN1-204ENST00000475344 GPRASP2Q96D09 838 aa7.75□□□□□ -1.17
LTN1-204ENST00000475344 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.75□□□□□ -1.17
LTN1-204ENST00000475344 TMEM82A0PJX8 343 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 BTBD11A6QL63 1104 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 RAP1GAPP47736 663 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 FZD5Q13467 585 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 CRTC3Q6UUV7 619 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 UNC5AQ6ZN44 842 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 CEP128Q6ZU80 1094 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 PPFIBP1Q86W92 1011 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 C7orf61Q8IZ16 206 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 LINC00116Q8NCU8 138 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 RGS22Q8NE09 1264 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 LINC01599Q8WXQ3 324 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 MAP6Q96JE9 813 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 PPP1R16BQ96T49 567 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 G6PC3Q9BUM1 346 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 CDADC1Q9BWV3 514 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms