RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 PTH1RQ03431 593 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 SLC9C1Q4G0N8 1177 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 RAET1EQ8TD07 263 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 USP6NLQ92738 828 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 MAP4K1Q92918 833 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 ATG4CQ96DT6 458 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 PPP1R9AQ9ULJ8 1098 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 A0A0G2JMZ2 1700 aa19.47■□□□□ 0.71
ATG4B-216ENST00000475195 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 GRK4P32298 578 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 ESR2Q92731 530 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 GMCL1Q96IK5 515 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
ATG4B-216ENST00000475195 VWA5AO00534 786 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 RRP12Q5JTH9 1297 aaKnown RBP19.45■□□□□ 0.7
ATG4B-216ENST00000475195 MORN1Q5T089 497 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 SLFN13Q68D06 897 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 RCSD1Q6JBY9 416 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 GPR142Q7Z601 462 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 PLEKHH3Q7Z736 793 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 LRRC47Q8N1G4 583 aaKnown RBP19.45■□□□□ 0.7
ATG4B-216ENST00000475195 PRPF38AQ8NAV1 312 aaKnown RBP19.45■□□□□ 0.7
ATG4B-216ENST00000475195 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 SHCBP1Q8NEM2 672 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 REPS2Q8NFH8 660 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 SH3TC2Q8TF17 1288 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 NUP88Q99567 741 aaPredicted RBP19.45■□□□□ 0.7
ATG4B-216ENST00000475195 SPATC1LQ9H0A9 340 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 TOMM22Q9NS69 142 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 STX8Q9UNK0 236 aa19.45■□□□□ 0.7
ATG4B-216ENST00000475195 ADCY3O60266 1144 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 PLA2G6O60733 806 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 XRCC5P13010 732 aaKnown RBP19.44■□□□□ 0.7
ATG4B-216ENST00000475195 TMEM132BQ14DG7 1078 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 ANKS1AQ92625 1134 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 SLF1Q9BQI6 1058 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 ESYT1Q9BSJ8 1104 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
ATG4B-216ENST00000475195 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-216ENST00000475195 NEDD4P46934 1319 aa19.44■□□□□ 0.7
ATG4B-216ENST00000475195 ATP2A1O14983 1001 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 RAD21O60216 631 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 CYP21A2P08686 494 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 BMP3P12645 472 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 PTPREP23469 700 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 DGKHQ86XP1 1220 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 SOCS4Q8WXH5 440 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 TMEM47Q9BQJ4 181 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 KRT23Q9C075 422 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 CNNM2Q9H8M5 875 aa19.43■□□□□ 0.7
ATG4B-216ENST00000475195 ZNF214Q9UL59 606 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-216ENST00000475195 SLC15A5A6NIM6 579 aa19.42■□□□□ 0.7
ATG4B-216ENST00000475195 STRNO43815 780 aa19.42■□□□□ 0.7
ATG4B-216ENST00000475195 TOP1P11387 765 aaKnown RBP19.42■□□□□ 0.7
ATG4B-216ENST00000475195 CCDC178Q5BJE1 867 aa19.42■□□□□ 0.7
ATG4B-216ENST00000475195 CCAR1Q8IX12 1150 aaKnown RBP19.42■□□□□ 0.7
ATG4B-216ENST00000475195 MROH8Q9H579 483 aa19.42■□□□□ 0.7
ATG4B-216ENST00000475195 KDM4AO75164 1064 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 SLC25A27O95847 323 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 FDX1P10109 184 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 MCCP23508 829 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 GRB14Q14449 540 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 RIOX2Q8IUF8 465 aa19.41■□□□□ 0.7
ATG4B-216ENST00000475195 LSG1Q9H089 658 aaKnown RBP19.41■□□□□ 0.7
ATG4B-216ENST00000475195 COL11A1P12107 1806 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-216ENST00000475195 B4E1Z4 1266 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 HOXC6P09630 235 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 ERCC3P19447 782 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 STAT3P40763 770 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 SLC1A4P43007 532 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 SOX10P56693 466 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 FAM160B2Q86V87 743 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 IQCA1Q86XH1 822 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 CHURC1Q8WUH1 139 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 DCAF4Q8WV16 495 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 SLC38A10Q9HBR0 1119 aa19.4■□□□□ 0.7
ATG4B-216ENST00000475195 RBBP6Q7Z6E9 1792 aaKnown RBP19.39■□□□□ 0.7
ATG4B-216ENST00000475195 KIAA0100Q14667 2235 aaKnown RBP19.39■□□□□ 0.69
ATG4B-216ENST00000475195 TMEM232C9JQI7 657 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 IGHA2P01877 340 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 SNHG28P0DPA3 235 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 ELNP15502 786 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 RGS2P41220 211 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 UBXN2AP68543 259 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 BTNL9Q6UXG8 535 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 TRMT44Q8IYL2 757 aaKnown RBP19.39■□□□□ 0.69
ATG4B-216ENST00000475195 ZSCAN10Q96SZ4 725 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-216ENST00000475195 TMEM106CQ9BVX2 250 aa19.39■□□□□ 0.69
ATG4B-216ENST00000475195 BRCA2P51587 3418 aa19.38■□□□□ 0.69
ATG4B-216ENST00000475195 POTEFA5A3E0 1075 aa19.38■□□□□ 0.69
ATG4B-216ENST00000475195 ZBED4O75132 1171 aa19.38■□□□□ 0.69
ATG4B-216ENST00000475195 CYP2B6P20813 491 aa19.38■□□□□ 0.69
ATG4B-216ENST00000475195 STAT2P52630 851 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms