RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
CLK1-209ENST00000472679 LRP8Q14114 963 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 FXNQ16595 210 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 MRM1Q6IN84 353 aaKnown RBP8.84□□□□□ -0.99
CLK1-209ENST00000472679 ZNF574Q6ZN55 896 aaPredicted RBP8.84□□□□□ -0.99
CLK1-209ENST00000472679 FAM178BQ8IXR5 827 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 SMARCC1Q92922 1105 aaPredicted RBP8.84□□□□□ -0.99
CLK1-209ENST00000472679 HAUS7Q99871 368 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 SUSD2Q9UGT4 822 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 PCDHB12Q9Y5F1 795 aa8.84□□□□□ -0.99
CLK1-209ENST00000472679 DDAH1O94760 285 aa8.83□□□□□ -1
CLK1-209ENST00000472679 GJB6O95452 261 aa8.83□□□□□ -1
CLK1-209ENST00000472679 EPHX1P07099 455 aa8.83□□□□□ -1
CLK1-209ENST00000472679 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
CLK1-209ENST00000472679 HIRIP3Q9BW71 556 aaPredicted RBP8.83□□□□□ -1
CLK1-209ENST00000472679 GP6Q9HCN6 339 aa8.83□□□□□ -1
CLK1-209ENST00000472679 GFOD1Q9NXC2 390 aa8.83□□□□□ -1
CLK1-209ENST00000472679 PRAMEF1O95521 474 aa8.82□□□□□ -1
CLK1-209ENST00000472679 CD8BP10966 210 aa8.82□□□□□ -1
CLK1-209ENST00000472679 CD247P20963 164 aa8.82□□□□□ -1
CLK1-209ENST00000472679 DDR2Q16832 855 aa8.82□□□□□ -1
CLK1-209ENST00000472679 GAB4Q2WGN9 574 aa8.82□□□□□ -1
CLK1-209ENST00000472679 THAP5Q7Z6K1 395 aa8.82□□□□□ -1
CLK1-209ENST00000472679 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
CLK1-209ENST00000472679 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
CLK1-209ENST00000472679 MISP3Q96FF7 219 aa8.82□□□□□ -1
CLK1-209ENST00000472679 KLHL25Q9H0H3 589 aa8.82□□□□□ -1
CLK1-209ENST00000472679 GPATCH2Q9NW75 528 aa8.82□□□□□ -1
CLK1-209ENST00000472679 SLC5A6Q9Y289 635 aa8.82□□□□□ -1
CLK1-209ENST00000472679 SCO2A0A1W2PP80 73 aa8.81□□□□□ -1
CLK1-209ENST00000472679 SIGLEC6O43699 453 aa8.81□□□□□ -1
CLK1-209ENST00000472679 TPP2P29144 1249 aaPredicted RBP8.81□□□□□ -1
CLK1-209ENST00000472679 ZNF445P59923 1031 aa8.81□□□□□ -1
CLK1-209ENST00000472679 NCAPHQ15003 741 aa8.81□□□□□ -1
CLK1-209ENST00000472679 VSIG10LQ86VR7 867 aa8.81□□□□□ -1
CLK1-209ENST00000472679 ASB11Q8WXH4 323 aa8.81□□□□□ -1
CLK1-209ENST00000472679 BRF1Q92994 677 aa8.81□□□□□ -1
CLK1-209ENST00000472679 FGD4Q96M96 766 aa8.81□□□□□ -1
CLK1-209ENST00000472679 HDAC8Q9BY41 377 aa8.81□□□□□ -1
CLK1-209ENST00000472679 TRIM55Q9BYV6 548 aa8.81□□□□□ -1
CLK1-209ENST00000472679 TRIT1Q9H3H1 467 aaKnown RBP8.81□□□□□ -1
CLK1-209ENST00000472679 MEIS1O00470 390 aa8.8□□□□□ -1
CLK1-209ENST00000472679 CLEC16AQ2KHT3 1053 aa8.8□□□□□ -1
CLK1-209ENST00000472679 ARTNQ5T4W7 220 aa8.8□□□□□ -1
CLK1-209ENST00000472679 HEATR6Q6AI08 1181 aaKnown RBP8.8□□□□□ -1
CLK1-209ENST00000472679 STK11IPQ8N1F8 1099 aa8.8□□□□□ -1
CLK1-209ENST00000472679 UBXN4Q92575 508 aa8.8□□□□□ -1
CLK1-209ENST00000472679 ASCC2Q9H1I8 757 aaPredicted RBP8.8□□□□□ -1
CLK1-209ENST00000472679 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CLK1-209ENST00000472679 ESR1P03372 595 aa8.79□□□□□ -1
CLK1-209ENST00000472679 IKZF1Q13422 519 aa8.79□□□□□ -1
CLK1-209ENST00000472679 SERINC3Q13530 473 aa8.79□□□□□ -1
CLK1-209ENST00000472679 ZNF513Q8N8E2 541 aaPredicted RBP8.79□□□□□ -1
CLK1-209ENST00000472679 FLCNQ8NFG4 579 aa8.79□□□□□ -1
CLK1-209ENST00000472679 ENOX1Q8TC92 643 aaKnown RBP8.79□□□□□ -1
CLK1-209ENST00000472679 SYTL5Q8TDW5 730 aaPredicted RBP8.79□□□□□ -1
CLK1-209ENST00000472679 PAK6Q9NQU5 681 aaPredicted RBP8.79□□□□□ -1
CLK1-209ENST00000472679 CHST7Q9NS84 486 aa8.79□□□□□ -1
CLK1-209ENST00000472679 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
CLK1-209ENST00000472679 WNT11O96014 354 aa8.78□□□□□ -1
CLK1-209ENST00000472679 CTSKP43235 329 aa8.78□□□□□ -1
CLK1-209ENST00000472679 TCEAL1Q15170 157 aa8.78□□□□□ -1
CLK1-209ENST00000472679 NBPF6Q5VWK0 638 aa8.78□□□□□ -1
CLK1-209ENST00000472679 CREG2Q8IUH2 290 aa8.78□□□□□ -1
CLK1-209ENST00000472679 DAGLBQ8NCG7 672 aa8.78□□□□□ -1
CLK1-209ENST00000472679 ADCY4Q8NFM4 1077 aa8.78□□□□□ -1
CLK1-209ENST00000472679 TCTN2Q96GX1 697 aa8.78□□□□□ -1
CLK1-209ENST00000472679 NBPF4Q96M43 638 aa8.78□□□□□ -1
CLK1-209ENST00000472679 APEX2Q9UBZ4 518 aa8.78□□□□□ -1
CLK1-209ENST00000472679 ANKRD34BA5PLL1 514 aa8.77□□□□□ -1.01
CLK1-209ENST00000472679 NOL9Q5SY16 702 aaKnown RBP8.77□□□□□ -1.01
CLK1-209ENST00000472679 ADAT2Q7Z6V5 191 aaKnown RBP8.77□□□□□ -1.01
CLK1-209ENST00000472679 LGR4Q9BXB1 951 aa8.77□□□□□ -1.01
CLK1-209ENST00000472679 CARS2Q9HA77 564 aaKnown RBP8.77□□□□□ -1.01
CLK1-209ENST00000472679 DUSP13Q9UII6 198 aa8.77□□□□□ -1.01
CLK1-209ENST00000472679 MSRB2Q9Y3D2 182 aa8.77□□□□□ -1.01
CLK1-209ENST00000472679 PCDHA11Q9Y5I1 949 aa8.77□□□□□ -1.01
CLK1-209ENST00000472679 SUSD5O60279 629 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 ITGA4P13612 1032 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 TMPRSS7Q7RTY8 843 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 FIBCD1Q8N539 461 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 USHBP1Q8N6Y0 703 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 ZNF655Q8N720 491 aaPredicted RBP8.76□□□□□ -1.01
CLK1-209ENST00000472679 DSCC1Q9BVC3 393 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 NOL6Q9H6R4 1146 aaKnown RBP8.76□□□□□ -1.01
CLK1-209ENST00000472679 ZFP64Q9NPA5 681 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 PRDM7Q9NQW5 492 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 PRR13Q9NZ81 148 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 SIRPGQ9P1W8 387 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 WHRNQ9P202 907 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 FHOD1Q9Y613 1164 aa8.76□□□□□ -1.01
CLK1-209ENST00000472679 CCDC85CA6NKD9 419 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 H0Y8X5 98 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
CLK1-209ENST00000472679 ZP2Q05996 745 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 PPP2R5DQ14738 602 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
CLK1-209ENST00000472679 CRTC3Q6UUV7 619 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 APBA2Q99767 749 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms