RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TMEM192Q8IY95 271 aa6.65□□□□□ -1.34
COL9A1-206ENST00000470652 LRRN4CLQ8ND94 238 aa6.65□□□□□ -1.34
COL9A1-206ENST00000470652 ENOX1Q8TC92 643 aaKnown RBP6.65□□□□□ -1.34
COL9A1-206ENST00000470652 GUCY2CP25092 1073 aa6.64□□□□□ -1.35
COL9A1-206ENST00000470652 EIF6P56537 245 aaKnown RBP6.64□□□□□ -1.35
COL9A1-206ENST00000470652 CLEC16AQ2KHT3 1053 aa6.64□□□□□ -1.35
COL9A1-206ENST00000470652 GAB4Q2WGN9 574 aa6.64□□□□□ -1.35
COL9A1-206ENST00000470652 NBPF9Q3BBW0 867 aa6.64□□□□□ -1.35
COL9A1-206ENST00000470652 SLC6A18Q96N87 628 aa6.64□□□□□ -1.35
COL9A1-206ENST00000470652 ESR1P03372 595 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 ACRP10323 421 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 GIPRP48546 466 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 NASPP49321 788 aaPredicted RBP6.63□□□□□ -1.35
COL9A1-206ENST00000470652 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
COL9A1-206ENST00000470652 CCDC81Q6ZN84 652 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 LSRQ86X29 649 aaPredicted RBP6.63□□□□□ -1.35
COL9A1-206ENST00000470652 VPS37DQ86XT2 251 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 CREG2Q8IUH2 290 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 CPLX3Q8WVH0 158 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 CCDC120Q96HB5 630 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
COL9A1-206ENST00000470652 PRDM7Q9NQW5 492 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 SUCOQ9UBS9 1254 aaKnown RBP6.63□□□□□ -1.35
COL9A1-206ENST00000470652 DUSP13Q9UII6 198 aa6.63□□□□□ -1.35
COL9A1-206ENST00000470652 WASH4PA8MWX3 477 aa6.62□□□□□ -1.35
COL9A1-206ENST00000470652 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
COL9A1-206ENST00000470652 SYTL5Q8TDW5 730 aaPredicted RBP6.62□□□□□ -1.35
COL9A1-206ENST00000470652 FAM84AQ96KN4 292 aa6.62□□□□□ -1.35
COL9A1-206ENST00000470652 ALPK1Q96QP1 1244 aa6.62□□□□□ -1.35
COL9A1-206ENST00000470652 MKRN2Q9H000 416 aaKnown RBP6.62□□□□□ -1.35
COL9A1-206ENST00000470652 STRIP2Q9ULQ0 834 aa6.62□□□□□ -1.35
COL9A1-206ENST00000470652 LRRC10BA6NIK2 292 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 LTKP29376 864 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 MESP2Q0VG99 397 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 UNC5AQ6ZN44 842 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 ZNF512BQ96KM6 892 aaPredicted RBP6.61□□□□□ -1.35
COL9A1-206ENST00000470652 CAPN10Q9HC96 672 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
COL9A1-206ENST00000470652 SHISA3A0PJX4 238 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 FAM86C2PA6NEL3 165 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 PMS1P54277 932 aaKnown RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 AUHQ13825 339 aaKnown RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 BBS9Q3SYG4 887 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 ZNF655Q8N720 491 aaPredicted RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 C19orf47Q8N9M1 422 aaKnown RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 DAGLBQ8NCG7 672 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 SYTL4Q96C24 671 aaPredicted RBP6.6□□□□□ -1.35
COL9A1-206ENST00000470652 PCDHB12Q9Y5F1 795 aa6.6□□□□□ -1.35
COL9A1-206ENST00000470652 SIGLEC6O43699 453 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 GDNFP39905 211 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 EGR3Q06889 387 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 ZYXQ15942 572 aaKnown RBP6.59□□□□□ -1.35
COL9A1-206ENST00000470652 TMC3Q7Z5M5 1100 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 CCDC144CPQ8IYA2 1237 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 SHDQ96IW2 340 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 HDAC8Q9BY41 377 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 PRDM14Q9GZV8 571 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 PRR13Q9NZ81 148 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 SLAMF8Q9P0V8 285 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 FBXL21Q9UKT6 434 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 CTNND2Q9UQB3 1225 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 PCDHA11Q9Y5I1 949 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 MROH2BQ7Z745 1585 aa6.59□□□□□ -1.35
COL9A1-206ENST00000470652 EIF4G1Q04637 1599 aaKnown RBP6.58□□□□□ -1.36
COL9A1-206ENST00000470652 AFMP43652 599 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
COL9A1-206ENST00000470652 MLANAQ16655 118 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 TTC6Q86TZ1 520 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.58□□□□□ -1.36
COL9A1-206ENST00000470652 TMEM59LQ9UK28 342 aa6.58□□□□□ -1.36
COL9A1-206ENST00000470652 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
COL9A1-206ENST00000470652 DNAJC25-GNG10A0A024R161 153 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 C9IYK1 514 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 PRAMEF1O95521 474 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 RAP1GAPP47736 663 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 CASP7P55210 303 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 RALGPS1Q5JS13 557 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 RNF111Q6ZNA4 994 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 ZSWIM9Q86XI8 627 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 C7orf61Q8IZ16 206 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 USHBP1Q8N6Y0 703 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 BHLHE22Q8NFJ8 381 aaPredicted RBP6.57□□□□□ -1.36
COL9A1-206ENST00000470652 DHX38Q92620 1227 aaKnown RBP6.57□□□□□ -1.36
COL9A1-206ENST00000470652 TCTN2Q96GX1 697 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 PHAXQ9H814 394 aaKnown RBP6.57□□□□□ -1.36
COL9A1-206ENST00000470652 CHST7Q9NS84 486 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 SMARCA4P51532 1647 aa6.57□□□□□ -1.36
COL9A1-206ENST00000470652 WIZO95785 1651 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 A0A1W2PQH9 124 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms