RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 KIAA0319Q5VV43 1072 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 STYK1Q6J9G0 422 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 PRR5LQ6MZQ0 368 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
RNF220-207ENST00000470498 SMC1BQ8NDV3 1235 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 ZNF622Q969S3 477 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNF220-207ENST00000470498 CFAP53Q96M91 514 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 TJP1Q07157 1748 aa6.33□□□□□ -1.4
RNF220-207ENST00000470498 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 KCPQ6ZWJ8 1503 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 GADD45BO75293 160 aaPredicted RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 PTPRAP18433 802 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 FGD1P98174 961 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 TAF7Q15545 349 aaPredicted RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 FBXO33Q7Z6M2 555 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 CACTIN-AS1Q8N1I8 211 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 POP1Q99575 1024 aaKnown RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 BHLHE41Q9C0J9 482 aaPredicted RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 EHD4Q9H223 541 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 MRC1P22897 1456 aa6.32□□□□□ -1.4
RNF220-207ENST00000470498 AFDNP55196 1824 aaKnown RBP6.32□□□□□ -1.4
RNF220-207ENST00000470498 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 CCDC88AQ3V6T2 1871 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 PRPF40AO75400 957 aaKnown RBP6.31□□□□□ -1.4
RNF220-207ENST00000470498 COL8A1P27658 744 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 PRKAR2BP31323 418 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 HTRA3P83110 453 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNF220-207ENST00000470498 ADAMTSL4Q6UY14 1074 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 CCNJLQ8IV13 435 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
RNF220-207ENST00000470498 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 TCF12Q99081 682 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
RNF220-207ENST00000470498 FAM177BA6PVY3 158 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
RNF220-207ENST00000470498 NPR1P16066 1061 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 CDC27P30260 824 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 ALDH1B1P30837 517 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNF220-207ENST00000470498 GRM2Q14416 872 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 DMRTC2Q8IXT2 367 aaPredicted RBP6.3□□□□□ -1.4
RNF220-207ENST00000470498 IL22RA1Q8N6P7 574 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 RGS22Q8NE09 1264 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 ASAP3Q8TDY4 903 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 PLVAPQ9BX97 442 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 BCL2L13Q9BXK5 485 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 ADAM19Q9H013 955 aa6.3□□□□□ -1.4
RNF220-207ENST00000470498 NOP53Q9NZM5 478 aaKnown RBP6.3□□□□□ -1.4
RNF220-207ENST00000470498 VIRMAQ69YN4 1812 aaKnown RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 SPDYE3A6NKU9 549 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 DDNO94850 711 aaPredicted RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 ST5P78524 1137 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 CNGB1Q14028 1251 aaPredicted RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 MCM10Q7L590 875 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 NBPF5PQ86XG9 351 aaPredicted RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 BSNDQ8WZ55 320 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 DUSP9Q99956 384 aaKnown RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 BCO2Q9BYV7 579 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 SH2B1Q9NRF2 756 aaPredicted RBP6.29□□□□□ -1.4
RNF220-207ENST00000470498 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 CARMIL3Q8ND23 1372 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 UBR2Q8IWV8 1755 aa6.29□□□□□ -1.4
RNF220-207ENST00000470498 COL3A1P02461 1466 aaPredicted RBP6.28□□□□□ -1.4
RNF220-207ENST00000470498 EPHA1P21709 976 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 HOXA10P31260 410 aaPredicted RBP6.28□□□□□ -1.4
RNF220-207ENST00000470498 GRIA4P48058 902 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 TAGLNQ01995 201 aaKnown RBP6.28□□□□□ -1.4
RNF220-207ENST00000470498 DCTN1Q14203 1278 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 HLFQ16534 295 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 RTKN2Q8IZC4 609 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 PNISRQ8TF01 805 aaKnown RBP6.28□□□□□ -1.4
RNF220-207ENST00000470498 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 PLEKHF1Q96S99 279 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 MUC3BQ9H195 1237 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 TAOK3Q9H2K8 898 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 PNNQ9H307 717 aaKnown RBP6.28□□□□□ -1.4
RNF220-207ENST00000470498 ABCB6Q9NP58 842 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 MIS18AQ9NYP9 233 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 SOX13Q9UN79 622 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 NIP7Q9Y221 180 aaKnown RBP eCLIP6.28□□□□□ -1.4
RNF220-207ENST00000470498 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
RNF220-207ENST00000470498 SLX4Q8IY92 1834 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms