RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 LINC00310P59036 64 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 MEX3CQ5U5Q3 659 aaKnown RBP7.55□□□□□ -1.2
VPS8-219ENST00000469479 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
VPS8-219ENST00000469479 MFSD2AQ8NA29 543 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 MYLIPQ8WY64 445 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 ELMO3Q96BJ8 720 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 KCNK12Q9HB15 430 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 SLIT1O75093 1534 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 MSH6P52701 1360 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 TMEM94Q12767 1356 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 NKTRP30414 1462 aaKnown RBP7.55□□□□□ -1.2
VPS8-219ENST00000469479 ARHGAP23Q9P227 1491 aa7.55□□□□□ -1.2
VPS8-219ENST00000469479 ROBO1Q9Y6N7 1651 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 CAP2P40123 477 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 FGD1P98174 961 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 LLGL2Q6P1M3 1020 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 PI16Q6UXB8 463 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 UBE2FQ969M7 185 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 RBCK1Q9BYM8 510 aa7.54□□□□□ -1.2
VPS8-219ENST00000469479 KCNA6P17658 529 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 TXNDC2Q86VQ3 553 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 MIPEPQ99797 713 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 ERVK-7P63135 1459 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 CCDC141Q6ZP82 1450 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 MBD5Q9P267 1494 aa7.53□□□□□ -1.2
VPS8-219ENST00000469479 CYP7A1P22680 504 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 ZSWIM5Q9P217 1185 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 TMEM59LQ9UK28 342 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 CYP8B1Q9UNU6 501 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 LRRIQ1Q96JM4 1722 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 PRDM15P57071 1507 aaPredicted RBP7.52□□□□□ -1.21
VPS8-219ENST00000469479 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.21
VPS8-219ENST00000469479 CAMSAP2Q08AD1 1489 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 MTUS2Q5JR59 1369 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 ENC1O14682 589 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 HPXP02790 462 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 KIR3DL1P43629 444 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 SLBPQ14493 270 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS8-219ENST00000469479 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 C3orf58Q8NDZ4 430 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 IRF2BPLQ9H1B7 796 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 PPM1HQ9ULR3 514 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 MAP3K1Q13233 1512 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 NCOA3Q9Y6Q9 1424 aa7.51□□□□□ -1.21
VPS8-219ENST00000469479 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 DNAJC25-GNG10A0A024R161 153 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 FOXD2O60548 495 aaPredicted RBP7.5□□□□□ -1.21
VPS8-219ENST00000469479 CBX7O95931 251 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 GSTT1P30711 240 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS8-219ENST00000469479 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 HDXQ7Z353 690 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 TIAM1Q13009 1591 aa7.5□□□□□ -1.21
VPS8-219ENST00000469479 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 TMEM2Q9UHN6 1383 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 TSPY4P0CV99 314 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 TSPY10P0CW01 314 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 LTKP29376 864 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 RALGPS1Q5JS13 557 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 PIWIL2Q8TC59 973 aaKnown RBP7.49□□□□□ -1.21
VPS8-219ENST00000469479 SRCIN1Q9C0H9 1055 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 WNT10AQ9GZT5 417 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 XIRP1Q702N8 1843 aaKnown RBP7.49□□□□□ -1.21
VPS8-219ENST00000469479 ARHGAP31Q2M1Z3 1444 aa7.49□□□□□ -1.21
VPS8-219ENST00000469479 COL16A1Q07092 1604 aaPredicted RBP7.49□□□□□ -1.21
VPS8-219ENST00000469479 KDM5AP29375 1690 aaKnown RBP7.48□□□□□ -1.21
VPS8-219ENST00000469479 PAGE1O75459 146 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 HK2P52789 917 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 ERVFC1P60507 584 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 NWD1Q149M9 1564 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 HID1Q8IV36 788 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 ZCCHC4Q9H5U6 513 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 LRP6O75581 1613 aa7.48□□□□□ -1.21
VPS8-219ENST00000469479 EIF2AK4Q9P2K8 1649 aaKnown RBP7.48□□□□□ -1.21
VPS8-219ENST00000469479 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 PRAMEF27A3QJZ7 478 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 ESR1P03372 595 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 RBM6P78332 1123 aaKnown RBP7.47□□□□□ -1.21
VPS8-219ENST00000469479 INPP5AQ14642 412 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 IRF2BP1Q8IU81 584 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 RIN3Q8TB24 985 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 BAHD1Q8TBE0 780 aaPredicted RBP7.47□□□□□ -1.21
VPS8-219ENST00000469479 ANKRD24Q8TF21 1146 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 SNCAIPQ9Y6H5 919 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 AHDC1Q5TGY3 1603 aaPredicted RBP7.47□□□□□ -1.21
VPS8-219ENST00000469479 SHPRHQ149N8 1683 aa7.47□□□□□ -1.21
VPS8-219ENST00000469479 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.22
VPS8-219ENST00000469479 TNK2Q07912 1038 aa7.46□□□□□ -1.22
VPS8-219ENST00000469479 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms