RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PAIP2Q9BPZ3 127 aaKnown RBP6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MFSD1Q9H3U5 465 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTAGE15A4D2H0 777 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SEMA3EO15041 775 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZBTB7BO15156 539 aaPredicted RBP6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PCCAP05165 728 aaPredicted RBP6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTAGE8P0CG41 777 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZNF75DP51815 510 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TRPC3Q13507 836 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SPA17Q15506 151 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IFIT1BQ5T764 474 aaKnown RBP6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IRAK1BP1Q5VVH5 260 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTAGE6Q86UF2 777 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTAGE4Q8IX94 777 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 OTUD6BQ8N6M0 293 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 C8orf58Q8NAV2 365 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CHAMP1Q96JM3 812 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HAUS7Q99871 368 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATG3Q9NT62 314 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 STIM2Q9P246 746 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SWAP70Q9UH65 585 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ODF2LQ9ULJ1 636 aa6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MAP2P11137 1827 aaKnown RBP6.96□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PXDNLA1KZ92 1463 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CYP27B1O15528 508 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HAUS3Q68CZ6 603 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NEK1Q96PY6 1258 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PRDM5Q9NQX1 630 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IFNKQ9P0W0 207 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 STX8Q9UNK0 236 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 COL3A1P02461 1466 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 XIRP1Q702N8 1843 aaKnown RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KCNQ2O43526 872 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PRR29P0C7W0 189 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ANXA13P27216 316 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DNA2P51530 1060 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 EVCP57679 992 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NBPF9Q3BBW0 867 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NCOA7Q8NI08 942 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ECHDC1Q9NTX5 307 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DONSONQ9NYP3 566 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CEP85Q6P2H3 762 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 COPS6Q7L5N1 327 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCDC17Q96LX7 622 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KATNAL1Q9BW62 490 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FARP1Q9Y4F1 1045 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 XDHP47989 1333 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CDHR2Q9BYE9 1310 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RGPD8O14715 1765 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 YEATS4O95619 227 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 VEGFAP15692 232 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FBLN1P23142 703 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RPS12P25398 132 aaKnown RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KARSQ15046 597 aaKnown RBP6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BCL9LQ86UU0 1499 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CEMIPQ8WUJ3 1361 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TNPO2O14787 897 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATP2C2O75185 946 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RHOXF2BP0C7M4 288 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CHMLP26374 656 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 R3HDM1Q15032 1099 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NACC1Q96RE7 527 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RHOXF2Q9BQY4 288 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LRRC2Q9BYS8 371 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HMG20BQ9P0W2 317 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TRPC6Q9Y210 931 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SLC4A4Q9Y6R1 1079 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SOCS7O14512 581 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CPA1P15085 419 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NAPAP54920 295 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PRKCQQ04759 706 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 WTAPQ15007 396 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PDZD4Q76G19 769 aaPredicted RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IL17REQ8NFR9 667 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RHPN1Q8TCX5 695 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PIK3R5Q8WYR1 880 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MRPS27Q92552 414 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GLG1Q92896 1179 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FNBP1Q96RU3 617 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 AMNQ9BXJ7 453 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LRRC37A3O60309 1634 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GRM8O00222 908 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 VAMP4O75379 141 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SERPINB2P05120 415 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MYZAPP0CAP1 466 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CETPP11597 493 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GANCQ8TET4 914 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RBM8AQ9Y5S9 174 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MEGF6O75095 1541 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms