RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 PCDHB12Q9Y5F1 795 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 GJB6O95452 261 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 PRNPP04156 253 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 CD247P20963 164 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-204ENST00000459902 DDR2Q16832 855 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 PMFBP1Q8TBY8 1022 aa9.67□□□□□ -0.86
CKAP2-204ENST00000459902 BCL7CQ8WUZ0 217 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-204ENST00000459902 SOGA3Q5TF21 947 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 HEATR6Q6AI08 1181 aaKnown RBP9.66□□□□□ -0.86
CKAP2-204ENST00000459902 MRM1Q6IN84 353 aaKnown RBP9.66□□□□□ -0.86
CKAP2-204ENST00000459902 THAP5Q7Z6K1 395 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 ASB11Q8WXH4 323 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 MISP3Q96FF7 219 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 ASCC2Q9H1I8 757 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-204ENST00000459902 TRIT1Q9H3H1 467 aaKnown RBP9.66□□□□□ -0.86
CKAP2-204ENST00000459902 GP6Q9HCN6 339 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 SUSD2Q9UGT4 822 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 MINPP1Q9UNW1 487 aa9.66□□□□□ -0.86
CKAP2-204ENST00000459902 HYAL3O43820 417 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-204ENST00000459902 EPHX1P07099 455 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 CD96P40200 585 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 ENOX1Q8TC92 643 aaKnown RBP9.65□□□□□ -0.86
CKAP2-204ENST00000459902 KLHL25Q9H0H3 589 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 PCMTD2Q9NV79 361 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 GFOD1Q9NXC2 390 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 SLC5A6Q9Y289 635 aa9.65□□□□□ -0.86
CKAP2-204ENST00000459902 U2SURPO15042 1029 aaKnown RBP9.64□□□□□ -0.87
CKAP2-204ENST00000459902 SIGLEC6O43699 453 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 PRAMEF1O95521 474 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 TPP2P29144 1249 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-204ENST00000459902 ZNF445P59923 1031 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 SERINC3Q13530 473 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 LRP8Q14114 963 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 TCEAL1Q15170 157 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 CLEC16AQ2KHT3 1053 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 TSPYL5Q86VY4 417 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-204ENST00000459902 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 FGD4Q96M96 766 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 HDAC8Q9BY41 377 aa9.64□□□□□ -0.87
CKAP2-204ENST00000459902 ADAMTS4O75173 837 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 NFXL1Q6ZNB6 911 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 SYTL5Q8TDW5 730 aaPredicted RBP9.63□□□□□ -0.87
CKAP2-204ENST00000459902 BRF1Q92994 677 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 CHST7Q9NS84 486 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 PRR13Q9NZ81 148 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 SIRPGQ9P1W8 387 aa9.63□□□□□ -0.87
CKAP2-204ENST00000459902 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
CKAP2-204ENST00000459902 CD8BP10966 210 aa9.62□□□□□ -0.87
CKAP2-204ENST00000459902 NOL9Q5SY16 702 aaKnown RBP9.62□□□□□ -0.87
CKAP2-204ENST00000459902 ZNF574Q6ZN55 896 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-204ENST00000459902 ADAT2Q7Z6V5 191 aaKnown RBP9.62□□□□□ -0.87
CKAP2-204ENST00000459902 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
CKAP2-204ENST00000459902 DAGLBQ8NCG7 672 aa9.62□□□□□ -0.87
CKAP2-204ENST00000459902 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
CKAP2-204ENST00000459902 MEIS1O00470 390 aa9.61□□□□□ -0.87
CKAP2-204ENST00000459902 ITGA4P13612 1032 aa9.61□□□□□ -0.87
CKAP2-204ENST00000459902 ZNF513Q8N8E2 541 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-204ENST00000459902 APBA2Q99767 749 aa9.61□□□□□ -0.87
CKAP2-204ENST00000459902 WHRNQ9P202 907 aa9.61□□□□□ -0.87
CKAP2-204ENST00000459902 A0A087WZG4 1122 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 SUSD5O60279 629 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 ESR1P03372 595 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 TMPRSS7Q7RTY8 843 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 ZNF655Q8N720 491 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-204ENST00000459902 TCTN2Q96GX1 697 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 LNPKQ9C0E8 428 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 GBP3Q9H0R5 595 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 APEX2Q9UBZ4 518 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 ANGEL1Q9UNK9 670 aaKnown RBP9.6□□□□□ -0.87
CKAP2-204ENST00000459902 FHOD1Q9Y613 1164 aa9.6□□□□□ -0.87
CKAP2-204ENST00000459902 SCO2A0A1W2PP80 73 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 IGSF3O75054 1194 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 PPM1BO75688 479 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 WNT11O96014 354 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 CTSKP43235 329 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 ZNF143P52747 638 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-204ENST00000459902 IKZF1Q13422 519 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 CREG2Q8IUH2 290 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 FLCNQ8NFG4 579 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 DSCC1Q9BVC3 393 aa9.59□□□□□ -0.87
CKAP2-204ENST00000459902 PAK6Q9NQU5 681 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-204ENST00000459902 CCDC85CA6NKD9 419 aa9.58□□□□□ -0.88
CKAP2-204ENST00000459902 FIBCD1Q8N539 461 aa9.58□□□□□ -0.88
CKAP2-204ENST00000459902 CCDC113Q9H0I3 377 aa9.58□□□□□ -0.88
CKAP2-204ENST00000459902 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
CKAP2-204ENST00000459902 NOL6Q9H6R4 1146 aaKnown RBP9.58□□□□□ -0.88
CKAP2-204ENST00000459902 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms