RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 JMYQ8N9B5 988 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 PJA1Q8NG27 643 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 NXPE3Q969Y0 559 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 CHMP4CQ96CF2 233 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 ELAC2Q9BQ52 826 aaKnown RBP5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 YIPF4Q9BSR8 244 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 SRCIN1Q9C0H9 1055 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 ISY1Q9ULR0 285 aaKnown RBP5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 F8W735 103 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 TM4SF5O14894 197 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 NBNO60934 754 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 WISP1O95388 367 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 CD68P34810 354 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 IREB2P48200 963 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 EIF6P56537 245 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PIP4K2BP78356 416 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 MTMR1Q13613 665 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PDE1CQ14123 709 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PPP2R5EQ16537 467 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 CDC37Q16543 378 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 RSPO4Q2I0M5 234 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 SPATC1Q76KD6 591 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 CLASRPQ8N2M8 674 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 AFAP1L2Q8N4X5 818 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 KLHL23Q8NBE8 558 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PI4K2BQ8TCG2 481 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 ASAP3Q8TDY4 903 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 WFDC12Q8WWY7 111 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 BSNDQ8WZ55 320 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 WNT8BQ93098 351 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 CCDC74AQ96AQ1 378 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 STRBPQ96SI9 672 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 CRBNQ96SW2 442 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 SARGQ9BW04 601 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 ALDH8A1Q9H2A2 487 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 AKTIPQ9H8T0 292 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 FBRSQ9HAH7 460 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PRDM11Q9NQV5 511 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 SEC31BQ9NQW1 1179 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 SLC5A4Q9NY91 659 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 UBP1Q9NZI7 540 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 PPT2Q9UMR5 302 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 MAPRE3Q9UPY8 281 aa5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 SUPT16HQ9Y5B9 1047 aaKnown RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 MORC2Q9Y6X9 1032 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P21-201ENST00000452483 A0A1W2PP55 124 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 PIP5K1CO60331 668 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZSCAN20P17040 1043 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 GPSM2P81274 684 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 CHAF1AQ13111 956 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 PABPC4Q13310 644 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TCIRG1Q13488 830 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TBC1D10BQ4KMP7 808 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TMEM67Q5HYA8 995 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 NKAPLQ5M9Q1 402 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 FBXW10Q5XX13 1052 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TTLL5Q6EMB2 1281 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 C1orf228Q6PIY5 440 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 NXPE4Q6UWF7 544 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 NECAB2Q7Z6G3 386 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 KRT77Q7Z794 578 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 IFNL2Q8IZJ0 200 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 AGGF1Q8N302 714 aaeCLIP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 JPH3Q8WXH2 748 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 SLC7A3Q8WY07 619 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 NKD1Q969G9 470 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TP53INP1Q96A56 240 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TRMT2BQ96GJ1 504 aaKnown RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 MEGF10Q96KG7 1140 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 TTC14Q96N46 770 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 CAMKK2Q96RR4 588 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 SSBP4Q9BWG4 385 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 CCDC8Q9H0W5 538 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 LIN7BQ9HAP6 207 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 NPHS2Q9NP85 383 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 PLCB1Q9NQ66 1216 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 CWC25Q9NXE8 425 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 KCNK4Q9NYG8 393 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZMYM5Q9UJ78 669 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 IPPQ9Y573 584 aa5.36□□□□□ -1.55
HMGB3P21-201ENST00000452483 A0A1W2PRQ8 180 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 METTL12A8MUP2 240 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DYRK3O43781 588 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 ADAM11O75078 769 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 RFPL1O75677 317 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDAH1O94760 285 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 ALX3O95076 343 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 GJB6O95452 261 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 SERPINB3P29508 390 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDIT3P35638 169 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 STK3Q13188 491 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDX10Q13206 875 aaKnown RBP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 COBLL1Q53SF7 1204 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 FAM133BQ5BKY9 247 aaKnown RBP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 JAKMIP3Q5VZ66 844 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms