RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 HOMER1Q86YM7 354 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 ZKSCAN4Q969J2 545 aaPredicted RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 ZSCAN31Q96LW9 406 aaPredicted RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 SMC3Q9UQE7 1217 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 LMAN1P49257 510 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 BMS1Q14692 1282 aaKnown RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 WDR78Q5VTH9 848 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 GADL1Q6ZQY3 521 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 OTUD5Q96G74 571 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 GPCPD1Q9NPB8 672 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 MORC2Q9Y6X9 1032 aaPredicted RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 NEDD4P46934 1319 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 WDR33Q9C0J8 1336 aaKnown RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 PPFIA3O75145 1194 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 BRD2P25440 801 aaKnown RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 INPP5BP32019 993 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 SLC1A4P43007 532 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 TRIM29Q14134 588 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 C16orf86Q6ZW13 317 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 CCDC84Q86UT8 332 aaPredicted RBP6.79□□□□□ -1.32
PROM1-201ENST00000447510 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 ANKRD13AQ8IZ07 590 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 GOPCQ9HD26 462 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 PAXBP1Q9Y5B6 917 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 SRCAPQ6ZRS2 3230 aa6.79□□□□□ -1.32
PROM1-201ENST00000447510 PITPNM2Q9BZ72 1349 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 GOLGA6L19H0YKK7 550 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 H3BQV1 296 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CTIFO43310 598 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 TTLL1O95922 423 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 AK2P54819 239 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 SPP2Q13103 211 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 E2F4Q16254 413 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 ERCC6LQ2NKX8 1250 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 IFFO2Q5TF58 517 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CCDC83Q8IWF9 413 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CDAN1Q8IWY9 1227 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CCDC34Q96HJ3 373 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 TM6SF1Q9BZW5 370 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 ANKRD65E5RJM6 399 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 ORC4O43929 436 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 NMT2O60551 498 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CDKL5O76039 1030 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 TOP1P11387 765 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 RTN1Q16799 776 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 SEC63Q9UGP8 760 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 SMIM22K7EJ46 135 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CTNND1O60716 968 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 NPM3O75607 178 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 ECM2O94769 699 aaPredicted RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 TOMM70O94826 608 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 BRD1O95696 1058 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 RASA1P20936 1047 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 SLFN13Q68D06 897 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 MOB2Q70IA6 237 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 NECAB1Q8N987 351 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 DDX11Q96FC9 970 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 EHD4Q9H223 541 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 ZBTB21Q9ULJ3 1066 aa6.78□□□□□ -1.32
PROM1-201ENST00000447510 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.78□□□□□ -1.32
PROM1-201ENST00000447510 AP5Z1O43299 807 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 PRR29P0C7W0 189 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 CALM1P0DP23 149 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 CALM2P0DP24 149 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 CALM3P0DP25 149 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 EEF2P13639 858 aaKnown RBP6.77□□□□□ -1.32
PROM1-201ENST00000447510 GNAQP50148 359 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 TPM4P67936 248 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 TMCO3Q6UWJ1 677 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 STOX1Q6ZVD7 989 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 MNS1Q8NEH6 495 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 NEDD1Q8NHV4 660 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 ZSWIM6Q9HCJ5 1215 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 ZCCHC17Q9NP64 241 aaKnown RBP6.77□□□□□ -1.32
PROM1-201ENST00000447510 ANAPC4Q9UJX5 808 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 TAF6LQ9Y6J9 622 aa6.77□□□□□ -1.32
PROM1-201ENST00000447510 XBP1P17861 261 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 CAP2P40123 477 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 EVX2Q03828 476 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 PLS1Q14651 629 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 CYB5R4Q7L1T6 521 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 BANK1Q8NDB2 785 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 DEF6Q9H4E7 631 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 SNED1Q8TER0 1413 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 ZMYM6O95789 1325 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms