RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 PRDX5P30044 214 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 PICALMQ13492 652 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 MCTP2Q6DN12 878 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 HERC6Q8IVU3 1022 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 ASIC4Q96FT7 647 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 NOC4LQ9BVI4 516 aaKnown RBP11.53□□□□□ -0.56
RPE-209ENST00000438191 SIP14410 1827 aa11.53□□□□□ -0.56
RPE-209ENST00000438191 ZNFX1Q9P2E3 1918 aaKnown RBP11.52□□□□□ -0.56
RPE-209ENST00000438191 LCHNA4D1U4 455 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 MYADML2A6NDP7 307 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 AKR1A1P14550 325 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 SIGLEC14Q08ET2 396 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
RPE-209ENST00000438191 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 PABPC5Q96DU9 382 aaKnown RBP11.52□□□□□ -0.57
RPE-209ENST00000438191 SCLYQ96I15 445 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
RPE-209ENST00000438191 PNNQ9H307 717 aaKnown RBP11.52□□□□□ -0.57
RPE-209ENST00000438191 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
RPE-209ENST00000438191 SLC5A4Q9NY91 659 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 SCN5AQ14524 2016 aa11.52□□□□□ -0.57
RPE-209ENST00000438191 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 ASGR1P07306 291 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 PFKMP08237 780 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 ZNF865P0CJ78 1059 aaPredicted RBP11.51□□□□□ -0.57
RPE-209ENST00000438191 TMPOP42166 694 aaKnown RBP11.51□□□□□ -0.57
RPE-209ENST00000438191 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
RPE-209ENST00000438191 JAG1P78504 1218 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 COL19A1Q14993 1142 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 VTI1AQ96AJ9 217 aa11.51□□□□□ -0.57
RPE-209ENST00000438191 ASNSP08243 561 aa11.5□□□□□ -0.57
RPE-209ENST00000438191 CST5P28325 142 aaPredicted RBP11.5□□□□□ -0.57
RPE-209ENST00000438191 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
RPE-209ENST00000438191 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
RPE-209ENST00000438191 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
RPE-209ENST00000438191 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
RPE-209ENST00000438191 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
RPE-209ENST00000438191 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
RPE-209ENST00000438191 MBTPS2O43462 519 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
RPE-209ENST00000438191 ERVK-21P61565 698 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 USP17L2Q6R6M4 530 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 SLC43A3Q8NBI5 491 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
RPE-209ENST00000438191 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
RPE-209ENST00000438191 STXBP3O00186 592 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
RPE-209ENST00000438191 ACTN1P12814 892 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 ERCC3P19447 782 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 ABRAQ8N0Z2 381 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
RPE-209ENST00000438191 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 C12orf42Q96LP6 360 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 TINF2Q9BSI4 451 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 MROH5Q6ZUA9 1318 aa11.48□□□□□ -0.57
RPE-209ENST00000438191 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
RPE-209ENST00000438191 PDGFBP01127 241 aaPredicted RBP11.47□□□□□ -0.57
RPE-209ENST00000438191 LTBRP36941 435 aa11.47□□□□□ -0.57
RPE-209ENST00000438191 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
RPE-209ENST00000438191 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
RPE-209ENST00000438191 MRPL38Q96DV4 380 aaKnown RBP11.47□□□□□ -0.57
RPE-209ENST00000438191 CHAMP1Q96JM3 812 aa11.47□□□□□ -0.57
RPE-209ENST00000438191 TGS1Q96RS0 853 aaKnown RBP11.47□□□□□ -0.57
RPE-209ENST00000438191 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 CLSPNQ9HAW4 1339 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 A0A1B0GUL7 405 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 C6orf222P0C671 652 aaPredicted RBP11.46□□□□□ -0.57
RPE-209ENST00000438191 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 MBIPQ9NS73 344 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 CLDND1Q9NY35 253 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
RPE-209ENST00000438191 WDR87Q6ZQQ6 2873 aa11.46□□□□□ -0.57
RPE-209ENST00000438191 DUSP11O75319 330 aaKnown RBP11.45□□□□□ -0.58
RPE-209ENST00000438191 RHBDL3P58872 404 aa11.45□□□□□ -0.58
RPE-209ENST00000438191 TCEAL5Q5H9L2 206 aa11.45□□□□□ -0.58
RPE-209ENST00000438191 CCDC30Q5VVM6 783 aa11.45□□□□□ -0.58
RPE-209ENST00000438191 SPATC1LQ9H0A9 340 aa11.45□□□□□ -0.58
RPE-209ENST00000438191 TRPV6Q9H1D0 765 aa11.45□□□□□ -0.58
RPE-209ENST00000438191 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms