RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 PTPRAP18433 802 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 INPP5BP32019 993 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 GUCY1A2P33402 732 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 GTF2A2P52657 109 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 PPATQ06203 517 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 TROAPQ12815 778 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 CUL4AQ13619 759 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 ME3Q16798 604 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 RTN1Q16799 776 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 ASPRV1Q53RT3 343 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 NOL8Q76FK4 1167 aaKnown RBP20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 ERO1BQ86YB8 467 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 DCAF4Q8WV16 495 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 OTUD5Q96G74 571 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 MS4A4AQ96JQ5 239 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 FEZ1Q99689 392 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 RBM27Q9P2N5 1060 aaKnown RBP20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 BRPF3Q9ULD4 1205 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 MYH8P13535 1937 aa20.6■□□□□ 0.89
CCDC144A-209ENST00000436374 USP17L10C9JJH3 530 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 FKTNO75072 461 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 CD2BP2O95400 341 aaKnown RBP20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 SMARCA1P28370 1054 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 COL9A3Q14050 684 aaPredicted RBP20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 RRP1BQ14684 758 aaKnown RBP20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 ZNF280CQ8ND82 737 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 NUP133Q8WUM0 1156 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 GMCL1Q96IK5 515 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 KIAA1683Q9H0B3 1180 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 HPS5Q9UPZ3 1129 aa20.59■□□□□ 0.89
CCDC144A-209ENST00000436374 PARP1P09874 1014 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 MLLT1Q03111 559 aaPredicted RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 CWC22Q9HCG8 908 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 GPHNQ9NQX3 736 aaPredicted RBP20.58■□□□□ 0.89
CCDC144A-209ENST00000436374 GREB1LQ9C091 1923 aaPredicted RBP20.58■□□□□ 0.88
CCDC144A-209ENST00000436374 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 SNHG28P0DPA3 235 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 SOX10P56693 466 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 GRM4Q14833 912 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 VCPKMTQ9H867 229 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 SNCAIPQ9Y6H5 919 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 ZHX2Q9Y6X8 837 aa20.57■□□□□ 0.88
CCDC144A-209ENST00000436374 SPDYE5A6NIY4 337 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 F5H6K3 240 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 CXCL11O14625 94 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 SLC1A4P43007 532 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 BACE1P56817 501 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 KLRC3Q07444 240 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 STK3Q13188 491 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 CRHR2Q13324 411 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 USP17L2Q6R6M4 530 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 TRIM22Q8IYM9 498 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 BRI3BPQ8WY22 251 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 WASF1Q92558 559 aa20.56■□□□□ 0.88
CCDC144A-209ENST00000436374 CCL15-CCL14A0A0B4J2E2 113 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 PDHBP11177 359 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 CETPP11597 493 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 CAP1Q01518 475 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 SCRN1Q12765 414 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 PPIL2Q13356 520 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 SNAPC2Q13487 334 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 CCL15Q16663 113 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 TMOD4Q9NZQ9 345 aa20.55■□□□□ 0.88
CCDC144A-209ENST00000436374 IFNAR1P17181 557 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 PDCP20941 246 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 JAG1P78504 1218 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 CCDC83Q8IWF9 413 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 RGS22Q8NE09 1264 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 SMC3Q9UQE7 1217 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 TNRC18O15417 2968 aaPredicted RBP20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 DOCK1Q14185 1865 aa20.54■□□□□ 0.88
CCDC144A-209ENST00000436374 PALM3A6NDB9 673 aaPredicted RBP20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 PLA2G6O60733 806 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 BMP3P12645 472 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 ZNF543Q08ER8 600 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 TRAF1Q13077 416 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 FBXO46Q6PJ61 603 aaPredicted RBP20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 STK36Q9NRP7 1315 aa20.53■□□□□ 0.88
CCDC144A-209ENST00000436374 RAD21O60216 631 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 NDUFB10O96000 172 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 SSRP1Q08945 709 aaKnown RBP20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 SPP2Q13103 211 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 SH3D19Q5HYK7 790 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms