RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TMEM106CQ9BVX2 250 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 PORCNQ9H237 461 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 BIN2Q9UBW5 565 aaPredicted RBP19.23■□□□□ 0.67
SMPD4-207ENST00000435455 PLXNB2O15031 1838 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 SOCS4Q8WXH5 440 aa19.22■□□□□ 0.67
SMPD4-207ENST00000435455 NUDT12Q9BQG2 462 aa19.22■□□□□ 0.67
SMPD4-207ENST00000435455 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
SMPD4-207ENST00000435455 GJD2Q9UKL4 321 aa19.22■□□□□ 0.67
SMPD4-207ENST00000435455 COL11A1P12107 1806 aaPredicted RBP19.21■□□□□ 0.67
SMPD4-207ENST00000435455 UBXN2AP68543 259 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 IMMTQ16891 758 aaKnown RBP19.21■□□□□ 0.67
SMPD4-207ENST00000435455 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
SMPD4-207ENST00000435455 GPR142Q7Z601 462 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 TBC1D10CQ8IV04 446 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
SMPD4-207ENST00000435455 SPATC1LQ9H0A9 340 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 IL25Q9H293 177 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 IL17RBQ9NRM6 502 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 TCP11L1Q9NUJ3 509 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 FBXO28Q9NVF7 368 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 STX8Q9UNK0 236 aa19.21■□□□□ 0.67
SMPD4-207ENST00000435455 WDR78Q5VTH9 848 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 SHCBP1Q8NEM2 672 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 ESR2Q92731 530 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
SMPD4-207ENST00000435455 SLF1Q9BQI6 1058 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 ADAMTS5Q9UNA0 930 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 IVNS1ABPQ9Y6Y0 642 aa19.2■□□□□ 0.66
SMPD4-207ENST00000435455 SLC15A5A6NIM6 579 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 SGSM2O43147 1006 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
SMPD4-207ENST00000435455 ELNP15502 786 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 NOVP48745 357 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 PLS1Q14651 629 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 PRPF38AQ8NAV1 312 aaKnown RBP19.19■□□□□ 0.66
SMPD4-207ENST00000435455 GMCL1Q96IK5 515 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 MOV10L1Q9BXT6 1211 aaKnown RBP19.19■□□□□ 0.66
SMPD4-207ENST00000435455 FEM1BQ9UK73 627 aa19.19■□□□□ 0.66
SMPD4-207ENST00000435455 VWA5AO00534 786 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 NMT2O60551 498 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 BMP3P12645 472 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 RGS2P41220 211 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 MORN1Q5T089 497 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 TRMT44Q8IYL2 757 aaKnown RBP19.18■□□□□ 0.66
SMPD4-207ENST00000435455 USP6NLQ92738 828 aa19.18■□□□□ 0.66
SMPD4-207ENST00000435455 STRNO43815 780 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 SLC25A27O95847 323 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 HMGCRP04035 888 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 PTPREP23469 700 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 MLLT1Q03111 559 aaPredicted RBP19.17■□□□□ 0.66
SMPD4-207ENST00000435455 TMEM132BQ14DG7 1078 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 CCDC178Q5BJE1 867 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 TTC14Q96N46 770 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 MROH8Q9H579 483 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 CNNM2Q9H8M5 875 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SMPD4-207ENST00000435455 NEDD4P46934 1319 aa19.17■□□□□ 0.66
SMPD4-207ENST00000435455 ZNF236Q9UL36 1845 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 POTEFA5A3E0 1075 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 MYCP01106 439 aaPredicted RBP19.16■□□□□ 0.66
SMPD4-207ENST00000435455 INHAP05111 366 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 TOP1P11387 765 aaKnown RBP19.16■□□□□ 0.66
SMPD4-207ENST00000435455 CCL5P13501 91 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 CYP2B6P20813 491 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 COPB2P35606 906 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 SLC1A4P43007 532 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 MTFR1Q15390 333 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 CHURC1Q8WUH1 139 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 APBA2Q99767 749 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 KRT23Q9C075 422 aa19.16■□□□□ 0.66
SMPD4-207ENST00000435455 ISY1Q9ULR0 285 aaKnown RBP19.16■□□□□ 0.66
SMPD4-207ENST00000435455 CTDP1Q9Y5B0 961 aaPredicted RBP19.16■□□□□ 0.66
SMPD4-207ENST00000435455 ZBED4O75132 1171 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 FDX1P10109 184 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 ERCC3P19447 782 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 MCCP23508 829 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 PTH1RQ03431 593 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 GRB14Q14449 540 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 FAM160B2Q86V87 743 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 SKAP1Q86WV1 359 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 IQCA1Q86XH1 822 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 DCAF4Q8WV16 495 aa19.15■□□□□ 0.66
SMPD4-207ENST00000435455 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 PLA2G6O60733 806 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 KDM4AO75164 1064 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 ZKSCAN1P17029 563 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-207ENST00000435455 STAT3P40763 770 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 STAT2P52630 851 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 IKQ13123 557 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-207ENST00000435455 RCSD1Q6JBY9 416 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 NCAPG2Q86XI2 1143 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 ABRAQ8N0Z2 381 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 REPS2Q8NFH8 660 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms