RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 COG1Q8WTW3 980 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 NELFBQ8WX92 580 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 PPM1EQ8WY54 764 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 MTRQ99707 1265 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 RWDD2AQ9UIY3 292 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 TTC26A0AVF1 554 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 KRT2P35908 639 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 EVA1CP58658 441 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 PKN1Q16512 942 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 JRKLQ9Y4A0 524 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 SAR1BQ9Y6B6 198 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 CDHR2Q9BYE9 1310 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
USP48-205ENST00000421625 TIAM2Q8IVF5 1701 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 LCORLQ8N3X6 602 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 FERMT2Q96AC1 680 aa23.94■■□□□ 1.42
USP48-205ENST00000421625 ANKRD18BA2A2Z9 1011 aa23.93■■□□□ 1.42
USP48-205ENST00000421625 PHF20Q9BVI0 1012 aa23.93■■□□□ 1.42
USP48-205ENST00000421625 MAP9Q49MG5 647 aa23.93■■□□□ 1.42
USP48-205ENST00000421625 CCDC122Q5T0U0 273 aa23.93■■□□□ 1.42
USP48-205ENST00000421625 SMARCC1Q92922 1105 aaPredicted RBP23.93■■□□□ 1.42
USP48-205ENST00000421625 SNAP23O00161 211 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 E2F4Q16254 413 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 HAUS4Q9H6D7 363 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 GDAQ9Y2T3 454 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 SLC4A4Q9Y6R1 1079 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 SPAG1Q07617 926 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 SPATA5Q8NB90 893 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 HINFPQ9BQA5 517 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 RNF26Q9BY78 433 aaPredicted RBP23.92■■□□□ 1.42
USP48-205ENST00000421625 AGPSO00116 658 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 UQCRFS1P1P0C7P4 283 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 IRX3P78415 501 aaPredicted RBP23.92■■□□□ 1.42
USP48-205ENST00000421625 PTGDRQ13258 359 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 DNAJC21Q5F1R6 531 aaKnown RBP23.92■■□□□ 1.42
USP48-205ENST00000421625 ANKRD20A12PQ8NF67 263 aa23.92■■□□□ 1.42
USP48-205ENST00000421625 ZCRB1Q8TBF4 217 aaKnown RBP23.92■■□□□ 1.42
USP48-205ENST00000421625 SMIM22K7EJ46 135 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 ZNF185O15231 689 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 CTSWP56202 376 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 PDXDC2PQ6P474 469 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 OR8K1Q8NGG5 319 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 MAP3K12Q12852 859 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 RASGRF1Q13972 1273 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 PAPD7Q5XG87 772 aaKnown RBP23.91■■□□□ 1.42
USP48-205ENST00000421625 WDR59Q6PJI9 974 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 UBAC1Q9BSL1 405 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 SELENOOQ9BVL4 669 aa23.91■■□□□ 1.42
USP48-205ENST00000421625 TRIM49BA6NDI0 452 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 TTC38Q5R3I4 469 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 KIF6Q6ZMV9 814 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 IRF2BP1Q8IU81 584 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 GNL3LQ9NVN8 582 aaKnown RBP23.9■■□□□ 1.42
USP48-205ENST00000421625 PDE2AO00408 941 aaPredicted RBP23.9■■□□□ 1.42
USP48-205ENST00000421625 PES1O00541 588 aaKnown RBP23.9■■□□□ 1.42
USP48-205ENST00000421625 MCM3P25205 808 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 HLFQ16534 295 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 TMTC2Q8N394 836 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 MIGA1Q8NAN2 632 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 JAKMIP2Q96AA8 810 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 CRACR2AQ9BSW2 395 aa23.9■■□□□ 1.42
USP48-205ENST00000421625 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
USP48-205ENST00000421625 ERVV-2B6SEH9 535 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 PLEKHA8P1O95397 391 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 XBP1P17861 261 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 EFCAB13Q8IY85 973 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 KAT14Q9H8E8 782 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 TNKSO95271 1327 aa23.89■■□□□ 1.42
USP48-205ENST00000421625 TARSL2A2RTX5 802 aaKnown RBP23.89■■□□□ 1.41
USP48-205ENST00000421625 RCCD1A6NED2 376 aa23.89■■□□□ 1.41
USP48-205ENST00000421625 PARP1P09874 1014 aaKnown RBP23.89■■□□□ 1.41
USP48-205ENST00000421625 PRCPP42785 496 aa23.89■■□□□ 1.41
USP48-205ENST00000421625 LUC7L2Q9Y383 392 aaKnown RBP23.89■■□□□ 1.41
USP48-205ENST00000421625 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.41
USP48-205ENST00000421625 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.41
USP48-205ENST00000421625 MB21D1Q8N884 522 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 DNAJC7Q99615 494 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 COL5A2P05997 1499 aaPredicted RBP23.88■■□□□ 1.41
USP48-205ENST00000421625 MYH13Q9UKX3 1938 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 GTPBP6O43824 516 aaPredicted RBP23.88■■□□□ 1.41
USP48-205ENST00000421625 ATP2C1P98194 919 aaPredicted RBP23.88■■□□□ 1.41
USP48-205ENST00000421625 ZNF658Q5TYW1 1059 aaPredicted RBP23.88■■□□□ 1.41
USP48-205ENST00000421625 TADA2BQ86TJ2 420 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 CAGE1Q8TC20 777 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 DRC1Q96MC2 740 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 NACAP1Q9BZK3 213 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 LACRTQ9GZZ8 138 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 EHD4Q9H223 541 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 C2orf54Q08AI8 447 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 FUT2Q10981 343 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 SEC23AQ15436 765 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 NPY5RQ15761 445 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 IL17AQ16552 155 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 CCNI2Q6ZMN8 369 aaPredicted RBP23.88■■□□□ 1.41
USP48-205ENST00000421625 KIAA1328Q86T90 577 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 RABEP2Q9H5N1 569 aa23.88■■□□□ 1.41
USP48-205ENST00000421625 SHOX2O60902 331 aaPredicted RBP23.87■■□□□ 1.41
USP48-205ENST00000421625 NLRP10Q86W26 655 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 TNFRSF25Q93038 417 aa23.87■■□□□ 1.41
USP48-205ENST00000421625 BMP15O95972 392 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms