RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 OXR1Q8N573 874 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 SNW1Q13573 536 aaKnown RBP8.9□□□□□ -0.98
ATG4C-204ENST00000414558 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
ATG4C-204ENST00000414558 LIN37Q96GY3 246 aaPredicted RBP8.9□□□□□ -0.98
ATG4C-204ENST00000414558 PRDM14Q9GZV8 571 aa8.9□□□□□ -0.98
ATG4C-204ENST00000414558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.9□□□□□ -0.98
ATG4C-204ENST00000414558 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
ATG4C-204ENST00000414558 FITM1A5D6W6 292 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 UNCXA6NJT0 531 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.89□□□□□ -0.99
ATG4C-204ENST00000414558 SIGLEC6O43699 453 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 PCBP3P57721 371 aaKnown RBP8.89□□□□□ -0.99
ATG4C-204ENST00000414558 MLANAQ16655 118 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 ZNF648Q5T619 568 aaPredicted RBP8.89□□□□□ -0.99
ATG4C-204ENST00000414558 LILRA2Q8N149 483 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 GPRASP2Q96D09 838 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 TCTN2Q96GX1 697 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 SUCOQ9UBS9 1254 aaKnown RBP8.89□□□□□ -0.99
ATG4C-204ENST00000414558 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.89□□□□□ -0.99
ATG4C-204ENST00000414558 PCDHB12Q9Y5F1 795 aa8.89□□□□□ -0.99
ATG4C-204ENST00000414558 SSU72P8A0A1W2PR75 194 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 PRAMEF1O95521 474 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 C8AP07357 584 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 ACRP10323 421 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 ERVFC1P60507 584 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 CHRNEQ04844 493 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 SPPL2CQ8IUH8 684 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 RASGRP4Q8TDF6 673 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 SLC38A3Q99624 504 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 GINM1Q9NU53 330 aa8.88□□□□□ -0.99
ATG4C-204ENST00000414558 FAM86C2PA6NEL3 165 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 SOX9P48436 509 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
ATG4C-204ENST00000414558 NR0B2Q15466 257 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 C9orf131Q5VYM1 1079 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 USHBP1Q8N6Y0 703 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 ANKS4BQ8N8V4 417 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 LINC00116Q8NCU8 138 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 SMARCC1Q92922 1105 aaPredicted RBP8.87□□□□□ -0.99
ATG4C-204ENST00000414558 FAM84AQ96KN4 292 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 CRBNQ96SW2 442 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 FOXP3Q9BZS1 431 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 CHST7Q9NS84 486 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 FBXL21Q9UKT6 434 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 TCFL5Q9UL49 500 aa8.87□□□□□ -0.99
ATG4C-204ENST00000414558 GUCY2CP25092 1073 aa8.86□□□□□ -0.99
ATG4C-204ENST00000414558 PMS1P54277 932 aaKnown RBP8.86□□□□□ -0.99
ATG4C-204ENST00000414558 LCE3BQ5TA77 95 aa8.86□□□□□ -0.99
ATG4C-204ENST00000414558 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
ATG4C-204ENST00000414558 EFR3BQ9Y2G0 817 aa8.86□□□□□ -0.99
ATG4C-204ENST00000414558 ZNF281Q9Y2X9 895 aa8.86□□□□□ -0.99
ATG4C-204ENST00000414558 RPL10P27635 214 aaKnown RBP8.85□□□□□ -0.99
ATG4C-204ENST00000414558 GJA8P48165 433 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 PKN1Q16512 942 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 PRR23BQ6ZRT6 265 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 WAPLQ7Z5K2 1190 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 LSRQ86X29 649 aaPredicted RBP8.85□□□□□ -0.99
ATG4C-204ENST00000414558 LINC01599Q8WXQ3 324 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 SP110Q9HB58 689 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 GFOD1Q9NXC2 390 aa8.85□□□□□ -0.99
ATG4C-204ENST00000414558 SYPP08247 313 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 ENDOUP21128 410 aaKnown RBP8.84□□□□□ -0.99
ATG4C-204ENST00000414558 TRHRP34981 398 aaPredicted RBP8.84□□□□□ -0.99
ATG4C-204ENST00000414558 MESP2Q0VG99 397 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 CCDC81Q6ZN84 652 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 C7orf61Q8IZ16 206 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 TGIF2Q9GZN2 237 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 C19orf44Q9H6X5 657 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
ATG4C-204ENST00000414558 C9IYK1 514 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
ATG4C-204ENST00000414558 BBS9Q3SYG4 887 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 UNC5AQ6ZN44 842 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 RUFY4Q6ZNE9 571 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 BHLHE22Q8NFJ8 381 aaPredicted RBP8.83□□□□□ -1
ATG4C-204ENST00000414558 OR6P1Q8NGX9 317 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 G6PC3Q9BUM1 346 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 RNF32Q9H0A6 362 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 NSUN3Q9H649 340 aaKnown RBP8.83□□□□□ -1
ATG4C-204ENST00000414558 CWC22Q9HCG8 908 aaKnown RBP8.83□□□□□ -1
ATG4C-204ENST00000414558 SLC12A7Q9Y666 1083 aa8.83□□□□□ -1
ATG4C-204ENST00000414558 SNX17Q15036 470 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 ZYXQ15942 572 aaKnown RBP8.82□□□□□ -1
ATG4C-204ENST00000414558 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
ATG4C-204ENST00000414558 MAP6Q96JE9 813 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 DIRC2Q96SL1 478 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 SRRTQ9BXP5 876 aaKnown RBP8.82□□□□□ -1
ATG4C-204ENST00000414558 CCSER2Q9H7U1 834 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 EBF1Q9UH73 591 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
ATG4C-204ENST00000414558 TMEM82A0PJX8 343 aa8.81□□□□□ -1
ATG4C-204ENST00000414558 MEIS1O00470 390 aa8.81□□□□□ -1
ATG4C-204ENST00000414558 FKTNO75072 461 aa8.81□□□□□ -1
ATG4C-204ENST00000414558 BMP8BP34820 402 aa8.81□□□□□ -1
ATG4C-204ENST00000414558 KIR2DL1P43626 348 aaPredicted RBP8.81□□□□□ -1
ATG4C-204ENST00000414558 KIR2DL2P43627 348 aaPredicted RBP8.81□□□□□ -1
ATG4C-204ENST00000414558 TIGD5Q53EQ6 642 aa8.81□□□□□ -1
ATG4C-204ENST00000414558 ANKRD39Q53RE8 183 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms